Gene Patl_1517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1517 
Symbol 
ID4172966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1821989 
End bp1822453 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content42% 
IMG OID638054526 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_661093 
Protein GI109897838 
COG category[R] General function prediction only 
COG ID[COG0456] Acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAG CCGAAGTGAG TGACGTACAC CTAGTTCAAT TGATGAGCTG GTTTGACAAC 
GAGGCGCAAC TAACGATGTG GTCGGGACCG AACTTTCGTT ATCCGTTTAC CGAATCCTCC
TTCAAAAAAG ACTTGAAGTT GTCAACGCTC TCATCTTATT CATTGTTATC ACCACAAGGA
GAGTTGCTGG CATTTGGTCA ATATTACTTG CGTGAAAAAA GGTGCCACTT AGGACGATTA
GTCGTTAATC CCGTAAAAAG AGGACAAGGC ATTGTGGCCA CGCTTATTGC GAAATTAACG
GTAAAAGGAA AAGAGCATCT ACAGGTAAAC ACCTGCTCAC TGTTTGTTTT TGAAGACAAT
TCCAACGCGA TCCATGCTTA TCAAAGGTTA GGCTTCAAAC AAAGCGAATA CCCAACTGAT
ATGCCCCTAA TAGACTGCAT TTATATGGTT AGCGATTTAA GCTAA
 
Protein sequence
MKLAEVSDVH LVQLMSWFDN EAQLTMWSGP NFRYPFTESS FKKDLKLSTL SSYSLLSPQG 
ELLAFGQYYL REKRCHLGRL VVNPVKRGQG IVATLIAKLT VKGKEHLQVN TCSLFVFEDN
SNAIHAYQRL GFKQSEYPTD MPLIDCIYMV SDLS