| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1513 |
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| Symbol | |
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| ID | 4172962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1818235 |
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| End bp | 1819581 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638054522 |
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| Product | amidase |
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| Protein accession | YP_661089 |
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| Protein GI | 109897834 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATCG CACTGCTCAG CCAAGACGTG AGTACGCATA TTGCGCTCAT CAAAGATAAA
CAAATCTCAG CTCAAGAGTT AGCAACCGAG CAACATAGCT TCATCAAACG TGTCAATTCG
TCGATAAATG CTTTTATCAG CTACGCCATG CCGAATGTTG AGCAAAGCGC TTCTTTCGAT
AAGTCCTTGT TTCAAGGGAT TTGTATTGGC GTGAAAGACA ATATTGATGT ACGCGGCTTT
GCTACTACAG CAGGCATGGC GACGCGAGTC GGGCGCCAAG CTAAACAAGA TGCGTTTGTG
GTCAGCCGTT TAAAGCAAAC CGGCGTTCAG GTGATGGGCA AGCTTAATAT GCACGAGGGC
GCGCTTGGCG CCACCAATCA AAACGAGCAT TTTGGAGATT GCCACAACCC CCATAAGCAT
GGCTATACCC CGGGCGGTTC ATCTGGCGGT TCAGCCGCTG CGGTGGCCTC TGGTATGGTG
GGATTGTCAC TGGGTACTGA TACCATGGGC TCGGTGCGTA TTCCTGCGGC GTATTGCGGT
ATTTTTGGTT TCAAACCCAG TCGCGGAGCG GTGAGTAATC ACGGCACTGT GACGTGCAGC
CGAGTAATGG ACAATATCGG CCCGCTAGCC CGCTCAGCAA AAGATTTAAC CTTAGCGCTC
AGTGTGATGA AAGCCTTCGA TGAGGGATGT GCGGCATCTA TTGATTTCAG CGCATTTAAT
CGCCTGTCGT ACACTGACAA TAAAGTATTA CTGGTACCTG AGAACTTAGA ACAATTAGGC
GTTGCACCAG ACATCGCTGC TGACTTTGCC ACTAATTTAA CGGCGTTCAC AGACTTAGGG
TTTAGTATTC AGTATTTTGA TTTTTCAGGA TACGACTTTG GCGCAGCCCG CAGAGCGGGT
TTGCTGCTGT GCGAAGCCGA TATGCGTATT GAACACCAAG AGGATTGGGC CAACAACCAG
CACAAATTTT CAGGATATAT GCGCGGCATG TTGTCCTATA TCGAACGAAA ATCTCCTATG
GATATGATGC AGTCTGAACG GGTTCTGGAT AACGCTAAAG TATTTGCGCG TCAATTGTTC
AAACAAGGCT GCGCGATATT GATGCCTACT GTTTTACAAC GGGCATTTGC GTTTGAAGAG
CCCGTGCCAG CCAATCAAGC CGACTTAACC AGTTTTGCCA ATCAAGCGGG CTTGCCGGCG
GTGTCTTTAC CCATGTTCAG TGATAATCCG TTACCCGCTG GAATGCAAAT TGTCGGGCCT
TTGGGCAGTG ATAATCAACT ATTGCAGTTA GCAGAGCGTT GGCAAGAACA CACGCAATTT
CGCTGTATCT TGCCTAGCGT GGACTAA
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| Protein sequence | MDIALLSQDV STHIALIKDK QISAQELATE QHSFIKRVNS SINAFISYAM PNVEQSASFD
KSLFQGICIG VKDNIDVRGF ATTAGMATRV GRQAKQDAFV VSRLKQTGVQ VMGKLNMHEG
ALGATNQNEH FGDCHNPHKH GYTPGGSSGG SAAAVASGMV GLSLGTDTMG SVRIPAAYCG
IFGFKPSRGA VSNHGTVTCS RVMDNIGPLA RSAKDLTLAL SVMKAFDEGC AASIDFSAFN
RLSYTDNKVL LVPENLEQLG VAPDIAADFA TNLTAFTDLG FSIQYFDFSG YDFGAARRAG
LLLCEADMRI EHQEDWANNQ HKFSGYMRGM LSYIERKSPM DMMQSERVLD NAKVFARQLF
KQGCAILMPT VLQRAFAFEE PVPANQADLT SFANQAGLPA VSLPMFSDNP LPAGMQIVGP
LGSDNQLLQL AERWQEHTQF RCILPSVD
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