Gene Patl_1502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1502 
Symbol 
ID4172228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp1805125 
End bp1805736 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content43% 
IMG OID638054511 
Producthypothetical protein 
Protein accessionYP_661078 
Protein GI109897823 
COG category 
COG ID 
TIGRFAM ID[TIGR02595] PEP-CTERM putative exosortase interaction domain 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0327061 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAAAA ATGCAAAAAT CACTTTCATG CTCAAACACC TAATCCTCGG GGCGGTTTTG 
CTATCAGGAG TATGTAAAAC AGCGAATGCT TTGCCCATCT TATCGTTTAA CAACACACAA 
AGTAACGTAA ATGAAACGGT TAATATCGGC GATACGATTA TTTTCGAACT CTGGTTTTCA 
GGATTAGAAA ACGTCGATGT AGGCGGGTTT GAATTTTTGC TTGGGTTCAA CGATGCTGTC 
AGCTCCCTTA ATTCCGCAGT GGGAAATGCG TCATTAGATG AGTTTGATAT TTTTGATTTA 
GCAGGAAATT CAAATCACGT CGATGCCTAC GCGGTATCAT TTACGGCCGA TTTATCCACT 
CAGGCTAATG AGTTTATGTT TGCGACGCTA TCGTTTATGG CCAGTGGTGC AGGCGTCAGC 
AATCTTACTT TTAATAATCT CATCGTGTCA GATTTAAACG CGTTGGCTAT GGATATCAGC 
GTGTTCGATG CACAAATTAC GGTGGTCGAT GATACAAACA ACATGCCGGT GCCAACCCCG 
ACATCGTGGG GTATATTCCT AATCGGAGTA TTAGCCCTAG CGTGTCGATA CAGACGGCAT 
AAACCAAGCT GA
 
Protein sequence
MLKNAKITFM LKHLILGAVL LSGVCKTANA LPILSFNNTQ SNVNETVNIG DTIIFELWFS 
GLENVDVGGF EFLLGFNDAV SSLNSAVGNA SLDEFDIFDL AGNSNHVDAY AVSFTADLST 
QANEFMFATL SFMASGAGVS NLTFNNLIVS DLNALAMDIS VFDAQITVVD DTNNMPVPTP 
TSWGIFLIGV LALACRYRRH KPS