| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1489 |
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| Symbol | |
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| ID | 4172215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1789363 |
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| End bp | 1790484 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638054499 |
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| Product | transport system permease protein |
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| Protein accession | YP_661066 |
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| Protein GI | 109897811 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGCCA ATATGACCTC TAATATGTCT ACCAACCTAA AAGCCTCGCC CATCACCCTT
CAATTTGCCC TACATGCAAG GCGAAAAAAG CATATGCGTG GCTTTACGTT TGTGCTCGCC
CTCGCAACGG TGTTGCTGCT AGTGGGGTTA CAATCAGGTA GTTTTGAGCA ATCTAGCCAC
GTTTTATTTG ATGTGCTAGT CAACAAGTTC AACCATCAAG CCTTGTCTCA AGAGCAGTAC
TTACAGTGGT ATGTCTTTTC TGAGCTGCGT GTACCACGCA TGTTTATGGC CATGTTTGTT
GGGGCATTAC TGGCGATGTC AGGTTGTGCG ATGCAAGGCT TGGTGCGAAA CCCGTTGGCG
GATCCCGGCT TAATAGGCAT TTCAGGGGGA GCGGCTGCAG CCGCCGCCAC AGCACTCGCG
CTGATTAACC ATTATCCACA ACTTGAAATA GGTGGGCAGT ATTTAATCGC CTTAAGTGCA
TTTATTGGTG CACTAATAGC CGTCTGGATT GTTTTGATAG TTGCGCGTAC GCCAGCAGGT
ATGGCGATTT CGTCGCTGAT TTTAGCAGGT GTTGCGGTTA ATGCATTGTC GGGTACACAT
ATTGGTGCAA TTAGTTATAT GGCCAATGAT GACGCGTTAC GGCAAATCAC TTACTGGACG
ATGGGCAGCT TAGGCGGGGT GACGTGGTCT AAAGTGCTGT TTGTCGGAAT ATTAAGTATT
CCGATTATCG CGCTTTATAT GCATTTGCGC CAACCACTGA ACTTGTTTGC TCTTGGCGAA
AACGAAGCCC AGTGCATGGG CCTTGAAGTC AACAAATACA AACGTTTGAT ACTCTGGCTA
GTGGCATTTT CGGTCGCTCT GGCTACCGCA CTGTGCGGCA TTATCGGCTT TGTTGGTTTG
GTGGTACCCC ATATTGCTCG CACGATTTTC AGCGCAGATC ACAAGTATTT GATGCCTGCC
TGCGGTGCGC TTGGCGCCAT ATTAATGTTG GGCGCTGATA CCGCTTCTCG GGCGTTATTT
CCCCCTCTTG AAATTCCTAT CGGGATAGTG ACCTCAGCTG TGGGAGCGCC GTTCTTTTTA
TACCTTTTAG CTAAACAAAA AAGGGGAGGG GCAATTGCTT AA
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| Protein sequence | MNANMTSNMS TNLKASPITL QFALHARRKK HMRGFTFVLA LATVLLLVGL QSGSFEQSSH
VLFDVLVNKF NHQALSQEQY LQWYVFSELR VPRMFMAMFV GALLAMSGCA MQGLVRNPLA
DPGLIGISGG AAAAAATALA LINHYPQLEI GGQYLIALSA FIGALIAVWI VLIVARTPAG
MAISSLILAG VAVNALSGTH IGAISYMAND DALRQITYWT MGSLGGVTWS KVLFVGILSI
PIIALYMHLR QPLNLFALGE NEAQCMGLEV NKYKRLILWL VAFSVALATA LCGIIGFVGL
VVPHIARTIF SADHKYLMPA CGALGAILML GADTASRALF PPLEIPIGIV TSAVGAPFFL
YLLAKQKRGG AIA
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