| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1488 |
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| Symbol | |
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| ID | 4172214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1788434 |
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| End bp | 1789366 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638054498 |
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| Product | periplasmic binding protein |
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| Protein accession | YP_661065 |
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| Protein GI | 109897810 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4558] ABC-type hemin transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.80443 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACAAGT TCGTTAGTTT AGTTTTTTTT CTTGCGTTAA TCAGTTTACA ACCATCAGCA
TACGCAGGCA CCTCGCTTGA ATCGGATGGC CAGCAAAGTC CCAAAAAAAT GCGCATTATC
GCCTCGGGCG GCAGCATAAC AGAAGTAATT TATGCCCTAG GTAAAGAGCA GCTTATTGTT
GCTACCGACA GCACCAGTTT ATTTCCTGCT GCCGCTGCTT CACTGCCTAA ACTGGGGTAT
TTTCGTCAGC TCAGTACAGA GGGCATTCTA GGGTTCCAGC CCACCCATTT ATTGGGTGCA
CAGGCTACTG GGCCTGAAAG TTTAGCTGAG CAGTTAACAG CTGCGGGTAT TCAGGTTCAC
ATATTTGATG AGCAACGAGA CGTAGCGGGT TTGCATCAGC TTATCAGTGA GATAGGCCAG
TTATTAAACG CTTCAGAAAA AGCGTTAGCA TTGAATCAAC AGATTACCCA ACAAGTAGCA
CAGCTAAAAG CCAAAGCAAG TCAACGTCGT TTGGCGAATG ATTCAAGCGC CCTTGCAGGC
GGGCATGACA AGGTCACGGC GCTGTTTGTG ATGTCTGACA GCGATCGTGG GTTAACCGTC
GCAGGGGGGA ATACTGTGCC TCAAGCCTTG TTTGATGATG CGGGTGTGAG AAACGCAGCA
CACGCTTTGA TAGATTATAA AGTGATGGAT AACGAATCGA TTTTAGCGGC CAACCCAGAC
ATCATTTTTG TCGCAAGTCA CCGTGCACGA GAGGCGAATG CATTACAGCG TTTATGCCAA
CACCCAGCAC TAAAAGCGAC AAATGCAGGG CGAAATTGTG CCATCAGTGT AATGGAAAGT
AGCAGTGCAT TAGGGTTGTC TCCTCGCTAT CCACAAGCCT TGCAAACGGT GATTGCGCGC
ACTGCTGGGT TTTACGCTGA CCAGAGCCGA TGA
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| Protein sequence | MYKFVSLVFF LALISLQPSA YAGTSLESDG QQSPKKMRII ASGGSITEVI YALGKEQLIV
ATDSTSLFPA AAASLPKLGY FRQLSTEGIL GFQPTHLLGA QATGPESLAE QLTAAGIQVH
IFDEQRDVAG LHQLISEIGQ LLNASEKALA LNQQITQQVA QLKAKASQRR LANDSSALAG
GHDKVTALFV MSDSDRGLTV AGGNTVPQAL FDDAGVRNAA HALIDYKVMD NESILAANPD
IIFVASHRAR EANALQRLCQ HPALKATNAG RNCAISVMES SSALGLSPRY PQALQTVIAR
TAGFYADQSR
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