| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1483 |
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| Symbol | |
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| ID | 4172209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1782092 |
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| End bp | 1782739 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638054493 |
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| Product | lysine exporter protein LysE/YggA |
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| Protein accession | YP_661060 |
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| Protein GI | 109897805 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATATTT TAAATTTCGA AGCTTTTTTG TTGGCTATCA CCCTATTAAC CCTCACCCCA
GGGATTGATA CCGTGTTGGT GATCAAAAAC TCGAGTCGTT CTGGAGGGCG TGACGGCATA
GTGACTAGCC TTGGCATCTG TCTTGGTTTG TTCGTACATG CGACCTTTTC AGCAGTGGGC
ATATCAGCGA TTTTATTACA ATCCGCTGAA CTTTTTATGG TAATAAAATG GATAGGCGCT
GCATATTTAA TTTGGTTAGG CATTGGAGCA TTAAAAGCTG CGCTTAAAGG TGATGCAAGT
GTTGCCATTG ATGCTAGCGG CGTGAGAATT TCAAGCCTGA ATCGCTCGTT AAAAGAGGGC
TTTTTATCGA ATGTGCTTAA CCCTAAAACC GCCGTGTTTT ATCTTGCCTT TTTACCGCAA
TTTATCGACC CTCAGTACTC GCCGTTTCTG CAAGCAATGA CTATGGCAGC AATACACTTT
GTGATTGCCA TGGTGTGGCA GTGCGGTCTT GCAGGCGCTG TCAGCTCAGC TAAACGCTTC
TTTGCTAGCA GTGCAGCTAT GCGCTGGATG GAAGGTATTT CTGGTAGCGT ATTAGTCTTT
CTAGGATCGA AACTTATTTT CGATGATGCT CCGGTAAAAT CCAATTAA
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| Protein sequence | MHILNFEAFL LAITLLTLTP GIDTVLVIKN SSRSGGRDGI VTSLGICLGL FVHATFSAVG
ISAILLQSAE LFMVIKWIGA AYLIWLGIGA LKAALKGDAS VAIDASGVRI SSLNRSLKEG
FLSNVLNPKT AVFYLAFLPQ FIDPQYSPFL QAMTMAAIHF VIAMVWQCGL AGAVSSAKRF
FASSAAMRWM EGISGSVLVF LGSKLIFDDA PVKSN
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