Gene Patl_1469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1469 
Symbol 
ID4172195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1763249 
End bp1763680 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content43% 
IMG OID638054479 
Producthypothetical protein 
Protein accessionYP_661046 
Protein GI109897791 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGATCAC GCGCTATTTT ATGGCCTACG GATTTTTCCG ATACTTCGTC ACATGCTTTG 
CAGTACGTCG TTGAAATGGC AAATTTAGAT CGAGTGGGTA TCCGTATTTT GCATGTCATT
GAGCAGCCTT CAGGAAATGA GAATTACATG ATCCTTACGA TCACTCCCTC TGAATTAGCT
AAGAATATGG AAGATGCTGC CGCAACTAAA ATGCATGATT TATTAAGTCA GTTAGATACG
AGTTTAAAGA TTGAGACGAT TATCCGACAC GGAGATGCGG TCGATGAAAT CTTGGCTGAA
ACCAATAGCG GTGATATTGG CATGGAGGTT ATCGCCAGCC ACGGAAGAAC CGGCATGTCT
CATTTTCTGC ATGATAATGT TGCCGACGCG ATCGTTAAAA AAGCGAACTG CCCAGTACTC
GTAATCAAAT AA
 
Protein sequence
MRSRAILWPT DFSDTSSHAL QYVVEMANLD RVGIRILHVI EQPSGNENYM ILTITPSELA 
KNMEDAAATK MHDLLSQLDT SLKIETIIRH GDAVDEILAE TNSGDIGMEV IASHGRTGMS
HFLHDNVADA IVKKANCPVL VIK