| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1450 |
|---|
| Symbol | |
|---|
| ID | 4173607 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | + |
|---|
| Start bp | 1744842 |
|---|
| End bp | 1745189 |
|---|
| Gene Length | 348 bp |
|---|
| Protein Length | 115 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638054460 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_661027 |
|---|
| Protein GI | 109897772 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00114574 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACCTA CTGACGTGCG GTTATTTATT CCTTGTAAAG ACTTCGCGGT ATCGCAAGCA
TTTTATCAGG CTTTGGGGTT TATTAAAGAG CCCGTTAATG AGCAGTTATG CATACTCAGT
TGTGGCGAGT GCACGTTCTT TTTGCAGAAC GTTTATAATC AAACGTTTGC TGAGAATTTA
ATGATGCAAC TTATCGTAAA AGACATCAAC GCTGTATATG AGCAAATTCA GAACATGGGC
GAACTAGCCG TTAAGCATGA GCCCATCAAA CAAGAGCCCT GGGGCAAGGT GATTTATTTA
TGGGGGCCAG CTGGTGAGTT ATGGCACATC ACCGAATTAA GCGTTTAA
|
|---|
| Protein sequence | MQPTDVRLFI PCKDFAVSQA FYQALGFIKE PVNEQLCILS CGECTFFLQN VYNQTFAENL
MMQLIVKDIN AVYEQIQNMG ELAVKHEPIK QEPWGKVIYL WGPAGELWHI TELSV
|
|---|
| |