| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1449 |
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| Symbol | |
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| ID | 4173606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1742355 |
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| End bp | 1744754 |
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| Gene Length | 2400 bp |
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| Protein Length | 799 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638054459 |
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| Product | tetratricopeptide TPR_2 |
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| Protein accession | YP_661026 |
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| Protein GI | 109897771 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4235] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR01905] doubled CXXCH domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTGGT ACGCGGCAGA TCTAACACAC ATGAAAAAGA TAAAAACATG TGCCTTATTA
TTCACTTTTT TTTGGTCTGC CTTGCTCACT GTTAACAGCC AAGCTGCAGA TATGGGCGAG
GGTTCGCTAT CTACCCAAGT ATCTTTGAAT CAAGTAAACC AAATAGCGGT TGCTGCAGCG
AGTCAAATAG CCTCTAAAAT CGACCCATCG CAATACGCTG GAGCGCAAGC ATGTCAGGGG
TGTCACCAAA GTGAGTATGA CCAATGGCAG CAGTCTGACC ACTTTAAAGC CATGCAAACG
GCAAGCAAAG ACACTGTACT GGGGGATTTC GGCGATATAG AAGTGAGATT TCATGATATA
GCAACGCGCT TTTTTATTGA AAATGGCGAG TACAAAATCA CGACAACCAA TAAGCAAAAC
AAGGTCGAAA CTTTTGATGT GCCTTATACG TTTGGTTTTT ACCCGTTGCA GCAATATTTA
ATTGACGTAG GCGAGGGCAA GCTACAAGCG TTTAACATTG CTTGGGACAG TCGCAGTGAA
GAGGAAGGTG GTCAGCGCTG GTATCACTTA CAACCCATTG AAAAAATCAC TCCTGAACAT
CCATTTTTCT GGCAGCGTCA TTTTCAAAAC TGGAATAGTC GCTGTGCGGA TTGTCACACA
ACCGATCTCA AACGCAATTT TGAACCTAAA ACGAATGCTT TTGATACGCA GTTTAGTGAG
GTGAATGTGG CCTGCGAAAG CTGCCATGGC CCGGCTGGTC AGCATATCAA GTTGGCTAAA
AGCGATAGTT TGAGCAAAGA CCATTCTGGC TTCAGCCAAC TTTTACCCGC GGTGAAAAAC
TTTGCGTTCA GCCCCAACAA TCCGATTGCC CATGCTGATG GCAAACCGAA CAACAGCGAA
GTTAATGTGT GTGCTCGCTG CCATTCATTG CGCACCCCTT TGTCACACCC TTTCTCAGTC
AACAAAGAAA ATGACAAAGA CACCCATGGT AAAAATGCCA TTATCCACAG TGCTAATCAG
CCTCAGCAAA GCTTTGTGGA TGACAACCGG TTAGAGTGGA TCCGTGCGCC GTTTTATCAC
GCTAATGGCA GCATCAATGA AGAGGTCTTT GTGGCCGGTT CGTTTATGCA AAGTAAGATG
CAACATGCGG GAGTGACTTG CTCGAACTGT CATAATGCCC ACACGGGGAA AGTGAAAATT
CAAGGTAACG GCTTGTGCTT ACAATGCCAT CAAGCTGAAA CCTTCAATAG CCCAGAGCAT
CATCACCATA CGCCGCAAAC AGAGGGGGCC ATGTGCGTAA ACTGCCACAT GCCTGAAAAA
ACCTACATGG GTGTGGATGA CAGGCGCGAC CACAGCTTTT TGATCCCGGA TTTGAGTTTT
GACAATGCGG CAAGTGAGCC TCAATCCTGC TTAGCCTGCC ATGATAAAGA CGACAAGCAT
TGGCGAGAAA CAAGTCACAA GCTTTGGGGG AGTAATTCGA AGGTAAATGA ATGGAAAGTG
GCTCGCGAGC ATGTGCAGAA TTTGGCCCCT CAGGGCTTAA GCGAGGCTAT CACTTATATT
CAAAACCCTG AGTACAGCTA TTTACGCCGA GCTTCTTTAT TAGCTGATCT GAGTCAGTAT
CGCTCACAAG AGGGGGTAAA TATCGCTCTT GAAAACCTCG AAAGCGACAA TGCATTATTG
CGCCGCGCTG CTGTTGAGTC GTTGAATATT CTAGGGCCAC AAGCACGTTG GCAGGTACTA
AGTCAGAAGC TCGACGAACC GAGTAAAGCA GTCCGCTTTG AAATGGCAAG AACGCTAGTG
GAAAGCGTAG GCCAGTTGTC ACGCTCAGAT AAAGCCAAAT TGATGCCACT GTTAAATGAA
TACCGAGATA TGCTTGCGAT GAACGCAGAC TCACCCATTA CCCAATTAGC CCTTGGTCAT
TTGGCTAGCA ACTTGGGGGA TTTAGCAGGA GCGGAGCAAG CGTATTTAAC CGCTTATAGA
ATTGAGCCTA GCTATATTCC GGTGTTAATT CAGGTGTCAG AGTTTTACCG TCAACAAGGC
CAAGACGCTA AGGGCGCGCG TTATTTGCAA GAAGCGTTAC AGATTGAACC AAATAACGCC
CAAGCCAATC ATGCGCTAGG TTTGTTCAAA ATTCGCCAGA AGCAATATGG GCAAGCCTTG
GCGAACTTGA AAATATCAGC ACACAGTGAT GAAGCTTTGC CGTCTTTTGC TTATGTTTAC
TCGGTGGCGC TTGACCATCA AGGGCAAACG GCAGTTGCTA TCAAAGAGTT AGAGCAGGCC
CATCAGCGCT GGCCAGCTGA TACTGACGTG TTAAGTGCGC TTGTCAGCTA TTTAAATAAA
ACGGGCCAAA CCGATAAAGC GCAGCAATAT CAGTCTATGT TGCGCGCGTT GCAACCATAA
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| Protein sequence | MKWYAADLTH MKKIKTCALL FTFFWSALLT VNSQAADMGE GSLSTQVSLN QVNQIAVAAA
SQIASKIDPS QYAGAQACQG CHQSEYDQWQ QSDHFKAMQT ASKDTVLGDF GDIEVRFHDI
ATRFFIENGE YKITTTNKQN KVETFDVPYT FGFYPLQQYL IDVGEGKLQA FNIAWDSRSE
EEGGQRWYHL QPIEKITPEH PFFWQRHFQN WNSRCADCHT TDLKRNFEPK TNAFDTQFSE
VNVACESCHG PAGQHIKLAK SDSLSKDHSG FSQLLPAVKN FAFSPNNPIA HADGKPNNSE
VNVCARCHSL RTPLSHPFSV NKENDKDTHG KNAIIHSANQ PQQSFVDDNR LEWIRAPFYH
ANGSINEEVF VAGSFMQSKM QHAGVTCSNC HNAHTGKVKI QGNGLCLQCH QAETFNSPEH
HHHTPQTEGA MCVNCHMPEK TYMGVDDRRD HSFLIPDLSF DNAASEPQSC LACHDKDDKH
WRETSHKLWG SNSKVNEWKV AREHVQNLAP QGLSEAITYI QNPEYSYLRR ASLLADLSQY
RSQEGVNIAL ENLESDNALL RRAAVESLNI LGPQARWQVL SQKLDEPSKA VRFEMARTLV
ESVGQLSRSD KAKLMPLLNE YRDMLAMNAD SPITQLALGH LASNLGDLAG AEQAYLTAYR
IEPSYIPVLI QVSEFYRQQG QDAKGARYLQ EALQIEPNNA QANHALGLFK IRQKQYGQAL
ANLKISAHSD EALPSFAYVY SVALDHQGQT AVAIKELEQA HQRWPADTDV LSALVSYLNK
TGQTDKAQQY QSMLRALQP
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