Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1444 |
Symbol | |
ID | 4173601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 1735724 |
End bp | 1736914 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638054454 |
Product | PepSY-associated TM helix |
Protein accession | YP_661021 |
Protein GI | 109897766 |
COG category | [S] Function unknown |
COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.156778 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAAA AACAACATAG TCTAAAAAAA CTTTATAACT TGCATGCTTG GTTAGGATTT CAGTTGGCAC TGTTAATGTT TGTTGTATTA GCCACTGGCA CTATAGCGAC TTTTTCTAAC GAAATTGATT GGCTCATTTT CCCTGAATTA AGATCAACTG AAAAACCTGC CGATGCACCT GATTCAATGC AAATAGATGA CTGGGTTAAG ATTTATCAAT CAGTTACCCA GGCCTATCCT AATAGTCCAA TCACCTCAAT GACTAAGCTC GATTCAGACT ATTTAACTTT TAGAGTAGTG TTAGATAACG ACTCGCTGCA CAATAGATTT GTGCAAGTTG ACCCGTGGAC CCACGAGGTC ACAGGCGATA TTCCACGTTT AACGGTACAG CGTTTTTTTC GCGATTTTCA TCGATATTTA TTTATGCCTG CGTTCCCTGG CTTGCTTATA GTTGGTCCAT TATCTATCGT ACTTTTACTC TCTTTGTACA CTGGAATTAA AACCACAAGA AACTGGCGTA AAGCCCTTTG GCGTATGCGT ATTACACAGG GTAAACGTAT ATTTTTAAGT GATTTACATA AAGTGTTAGG TTTGTGGGGC TTGTGGTTTA CATTGCTAAT GGCTATCACA GGTGCTTGGT ATTTCTATGA ATTTGGTAAC GCCGTGGCGG GTTCAAACAT TGAGCCATCA GGCCCGATAG TCGAGAACAG CACCACTATT GAAAGAAAAG TGTTAAGTGT GGATGAGTTT CAAACTATTG TACAAAAAGC GCAAAATGCC CATGATAATT GGGAAATTAC TGCGTTTTAC ATGCCAATTG CGAGTGACAG AAGCTTTCAA CTACGAGGAG TGAGTAACAG TAACCCCATT ATACGCAACA GAGCCCTTAG GGTATTCATT GATCCTCAAT CGCACGTTAT TATTGATACA TGGTCACCTG ATTCAATTTC GATTCAAGCC TATATCAACG AATATGCTGA TCCGCTACAT TTTGGTAATT TCGGAGGTTT TTGGTTAAAA ATGGTTTGGT TTGTTTTTGG GATAGCATTG ACTGCTATGT CTTATACTGG TGTTTTGATG ACTTGGAAAC GGACTAAGTC CTCAGCTTTA ACTCGTGCGC AAAAGATGAC TTTACCTGTT TTTATTTTAT CCCTAACCGC TTTTATTTTT TGGTTTTCAA GGTTTATCTA G
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Protein sequence | MAKKQHSLKK LYNLHAWLGF QLALLMFVVL ATGTIATFSN EIDWLIFPEL RSTEKPADAP DSMQIDDWVK IYQSVTQAYP NSPITSMTKL DSDYLTFRVV LDNDSLHNRF VQVDPWTHEV TGDIPRLTVQ RFFRDFHRYL FMPAFPGLLI VGPLSIVLLL SLYTGIKTTR NWRKALWRMR ITQGKRIFLS DLHKVLGLWG LWFTLLMAIT GAWYFYEFGN AVAGSNIEPS GPIVENSTTI ERKVLSVDEF QTIVQKAQNA HDNWEITAFY MPIASDRSFQ LRGVSNSNPI IRNRALRVFI DPQSHVIIDT WSPDSISIQA YINEYADPLH FGNFGGFWLK MVWFVFGIAL TAMSYTGVLM TWKRTKSSAL TRAQKMTLPV FILSLTAFIF WFSRFI
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