Gene Patl_1444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1444 
Symbol 
ID4173601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1735724 
End bp1736914 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content39% 
IMG OID638054454 
ProductPepSY-associated TM helix 
Protein accessionYP_661021 
Protein GI109897766 
COG category[S] Function unknown 
COG ID[COG3182] Uncharacterized iron-regulated membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.156778 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAA AACAACATAG TCTAAAAAAA CTTTATAACT TGCATGCTTG GTTAGGATTT 
CAGTTGGCAC TGTTAATGTT TGTTGTATTA GCCACTGGCA CTATAGCGAC TTTTTCTAAC
GAAATTGATT GGCTCATTTT CCCTGAATTA AGATCAACTG AAAAACCTGC CGATGCACCT
GATTCAATGC AAATAGATGA CTGGGTTAAG ATTTATCAAT CAGTTACCCA GGCCTATCCT
AATAGTCCAA TCACCTCAAT GACTAAGCTC GATTCAGACT ATTTAACTTT TAGAGTAGTG
TTAGATAACG ACTCGCTGCA CAATAGATTT GTGCAAGTTG ACCCGTGGAC CCACGAGGTC
ACAGGCGATA TTCCACGTTT AACGGTACAG CGTTTTTTTC GCGATTTTCA TCGATATTTA
TTTATGCCTG CGTTCCCTGG CTTGCTTATA GTTGGTCCAT TATCTATCGT ACTTTTACTC
TCTTTGTACA CTGGAATTAA AACCACAAGA AACTGGCGTA AAGCCCTTTG GCGTATGCGT
ATTACACAGG GTAAACGTAT ATTTTTAAGT GATTTACATA AAGTGTTAGG TTTGTGGGGC
TTGTGGTTTA CATTGCTAAT GGCTATCACA GGTGCTTGGT ATTTCTATGA ATTTGGTAAC
GCCGTGGCGG GTTCAAACAT TGAGCCATCA GGCCCGATAG TCGAGAACAG CACCACTATT
GAAAGAAAAG TGTTAAGTGT GGATGAGTTT CAAACTATTG TACAAAAAGC GCAAAATGCC
CATGATAATT GGGAAATTAC TGCGTTTTAC ATGCCAATTG CGAGTGACAG AAGCTTTCAA
CTACGAGGAG TGAGTAACAG TAACCCCATT ATACGCAACA GAGCCCTTAG GGTATTCATT
GATCCTCAAT CGCACGTTAT TATTGATACA TGGTCACCTG ATTCAATTTC GATTCAAGCC
TATATCAACG AATATGCTGA TCCGCTACAT TTTGGTAATT TCGGAGGTTT TTGGTTAAAA
ATGGTTTGGT TTGTTTTTGG GATAGCATTG ACTGCTATGT CTTATACTGG TGTTTTGATG
ACTTGGAAAC GGACTAAGTC CTCAGCTTTA ACTCGTGCGC AAAAGATGAC TTTACCTGTT
TTTATTTTAT CCCTAACCGC TTTTATTTTT TGGTTTTCAA GGTTTATCTA G
 
Protein sequence
MAKKQHSLKK LYNLHAWLGF QLALLMFVVL ATGTIATFSN EIDWLIFPEL RSTEKPADAP 
DSMQIDDWVK IYQSVTQAYP NSPITSMTKL DSDYLTFRVV LDNDSLHNRF VQVDPWTHEV
TGDIPRLTVQ RFFRDFHRYL FMPAFPGLLI VGPLSIVLLL SLYTGIKTTR NWRKALWRMR
ITQGKRIFLS DLHKVLGLWG LWFTLLMAIT GAWYFYEFGN AVAGSNIEPS GPIVENSTTI
ERKVLSVDEF QTIVQKAQNA HDNWEITAFY MPIASDRSFQ LRGVSNSNPI IRNRALRVFI
DPQSHVIIDT WSPDSISIQA YINEYADPLH FGNFGGFWLK MVWFVFGIAL TAMSYTGVLM
TWKRTKSSAL TRAQKMTLPV FILSLTAFIF WFSRFI