| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1440 |
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| Symbol | |
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| ID | 4173597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1730483 |
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| End bp | 1731457 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638054450 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_661017 |
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| Protein GI | 109897762 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTG CTGATTTACA GGTGCTGCTA AAAGTGGCTG AGCTTCATTC CATTTCCGCG
GCGGCAAACC AACTCGATAT GAGCTCTTCG GCGGCCAGTG TGGCTTTGAA GCGCATCGAG
ACGCAGCTCG GCGCGCAACT GTTCGTGCGT ACCACGAGGC AAATACGCCT TACGTCTGAA
GGCGAACGCT ACTTACCCCT TTGCCAGCAG GCCTTGGATT TACTGCAACA GGGGCAAGTA
TTAATTAACG AAGAGCAACA ATCGATCAGT GGTGAGGTGC GCATGGCCGT ATCGTCAGAA
ATGGGTCGAA ATCTTATGCG TGTGCTGCTG AATAATCTTA TGCGCAAGCA CTGCGCTGTG
ACATTGCGCT TACATGTGAG TGATAGTAGA GCCGATTTTT ACCGCGATGG TGTTGATGTT
GCTTTGCGTG CGATCACCAA AGATGCGGCG AAAGAGCTTA ATTTATATGG CTTTAAAATA
TGTAATATTC CCCATGTGCT TTGCGCTGCC CCAAGCTATA TTGCCGAGCA CGGCGAGCCG
CAAACCCCTG ACGAGCTGCC CCAACACAAC GCCCTGCTTT ATAAGCTCTA TGAAGTGGTG
CATGACGGTT GGGAGCTTTA TCAAAACGAC CAACAGTACA AAATCAAAAT GAATAGCGAT
CGCGCCGTGA ACGATGGCGA TATTGTTAGG CGCTGGTGTG TCGACGGCGA AGGTATTGCC
AAAAAATCAG CCATTGATGT GGCCCAAGAT TTACTAGCAG GTCAGCTTAA GCGGCTTATG
CCCGAATATA AAATTCCGTT AACCCAAATG TGGTTAGTGC TACCCAGTCG CCAGTTAATT
TCCCCCGCTA TTCGCCTCAT TCGAGATGAA CTGAAACGGA ACATCAACGA ATTGAGAACA
CAATTAATCA CCAACCAACT CTTATCCGAA CAAGAGTGGC CAAAAGCCGA GGAAGAATGG
CCACAGGCGG AGTGA
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| Protein sequence | MKIADLQVLL KVAELHSISA AANQLDMSSS AASVALKRIE TQLGAQLFVR TTRQIRLTSE
GERYLPLCQQ ALDLLQQGQV LINEEQQSIS GEVRMAVSSE MGRNLMRVLL NNLMRKHCAV
TLRLHVSDSR ADFYRDGVDV ALRAITKDAA KELNLYGFKI CNIPHVLCAA PSYIAEHGEP
QTPDELPQHN ALLYKLYEVV HDGWELYQND QQYKIKMNSD RAVNDGDIVR RWCVDGEGIA
KKSAIDVAQD LLAGQLKRLM PEYKIPLTQM WLVLPSRQLI SPAIRLIRDE LKRNINELRT
QLITNQLLSE QEWPKAEEEW PQAE
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