| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1434 |
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| Symbol | |
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| ID | 4173591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1724342 |
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| End bp | 1725973 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638054444 |
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| Product | ferredoxin-dependent glutamate synthase |
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| Protein accession | YP_661011 |
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| Protein GI | 109897756 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.505449 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAACAA AACTGATAAA AATTGCAATT TGGTCAGCTG TGGTCGTTCT ACTCCTGAGC
TTGTTGTGGC TCCCCGCGCT TTGGCTGTTC GTACTGCTGA TCCCGATCGT GGCATTAGGT
TATTACGATT ATCACCAAAC ACGGCACAGC ATTTTACGTA ATTTTCCCGT TGTGGGTCAC
GGCCGCTGGA TAATGGAGCG CATTCGCCCC TTCGTTCGTC AGTATTTTTT CGAATCAGAA
ACCGACGGCA CACCGATTAC CCGTATGTTC CGCTCATTGA TTTACCAAAG AGCAAAAGGC
AGTTTGGACT CCAACCCCTA CGGCACAAAA ATCGATACCC AGCGCGTGGG CTACGAATGG
ATAGGCCACT CAATGGCAGC AAAGCACCAT GACAGCAAAC GCCCTGCCCC GCGCATTACC
GTTGGTGGCC CCGATTGCAC CCAGCCTTAC GAAGCCAGTT TTTTCAATAT CTCCGCCATG
AGTTTTGGCG CACTGAGCGA TAACGCCATT CGAGCACTTA ATAAAGGCGC GGCCATAGGC
GGCTTTTACC ACAACACGGG TGAAGGCAGC GTCAGTGATT ACCACCTAGA AAACGGCGGT
GATATTGTAT GGCAAATTGG TACCGGTTAT TTTGGTTGTC GAGATAAAGA AGGCAATTTT
GCTCCTGAAG CATTTCAAAA AATTGCCCAC AAAGATGTCA TCAAGATGAT TGAAATTAAA
CTCAGCCAAG GGGCAAAACC AGGCCATGGC GGCCTATTAC CCGCTGATAA AAATACCAAT
GAAATTGCTA GAATTCGCCT TGTTGAGCCC GGCACGCAAG TGGACTCGCC GCCATCTCAC
AGCGCGTTTG AAACACCTAT TGAAATGATG CACTTCGTTA AACAACTGCG GGAGTTATCT
GGTGGAAAAC CAGTGGGGTT TAAACTGTGT ATTGGCCGGG CCAGCGAATT TGTTGCTGTG
TGTAAAGCCA TGGTTGAAAC CGGTATCAAA CCAGATTTCA TCACAGTGGA TGGCGGTGAA
GGTGGCACTG GCGCCGCTCC ACTTGAGTTC TCAAATTCCG TAGGCATGCC ATTGCGTGAA
GCCCTATCAT TCGTATGTGA CATTTTGGTT GGCTTCGATT TGAAAAAAGA CATTCGCGTT
ATTGCCAGTG GTAAAACCTT CAGTGGCTTT CATTTGGTCA AAAACCTCGC CCTAGGTGCA
GATATGTGCA ACAGCGCCAG AGGTATGATG GTGGCGTTAG GCTGTGTACA GTCATTAGAA
TGCAACACCA ACAAGTGTCC AACAGGCATA GCCACGCAAG ACCCTAAATT AGCTAGAGGT
TTAGTGGTGC CAGATAAAGC CGAGCGCGTG GCGCGTTATC ACAAGGCCAC GGTGAATTCG
GCATTAGAAA TTATTGCATC TGCAGGCTTA CGTAACACAG AGGATCTCAA TCGCTCACAT
ATTTTCAGGC GTGTCAGTCA AACCGAAGTA CGCCGCTTCG ATGAAATATA CCAAAGCCCA
ACCACAGGCA GTTTTTTTGA TGAAGAAAAA CCGAGCAAGT TTGCTCAGGC ACTTAAAGAA
GCCAGCCCAG ATAGCTTTTA TCCGAAACAA TATTTAGCAG AGACGGACGA AGGGTTAAAA
GAAGTGAGTT AA
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| Protein sequence | METKLIKIAI WSAVVVLLLS LLWLPALWLF VLLIPIVALG YYDYHQTRHS ILRNFPVVGH
GRWIMERIRP FVRQYFFESE TDGTPITRMF RSLIYQRAKG SLDSNPYGTK IDTQRVGYEW
IGHSMAAKHH DSKRPAPRIT VGGPDCTQPY EASFFNISAM SFGALSDNAI RALNKGAAIG
GFYHNTGEGS VSDYHLENGG DIVWQIGTGY FGCRDKEGNF APEAFQKIAH KDVIKMIEIK
LSQGAKPGHG GLLPADKNTN EIARIRLVEP GTQVDSPPSH SAFETPIEMM HFVKQLRELS
GGKPVGFKLC IGRASEFVAV CKAMVETGIK PDFITVDGGE GGTGAAPLEF SNSVGMPLRE
ALSFVCDILV GFDLKKDIRV IASGKTFSGF HLVKNLALGA DMCNSARGMM VALGCVQSLE
CNTNKCPTGI ATQDPKLARG LVVPDKAERV ARYHKATVNS ALEIIASAGL RNTEDLNRSH
IFRRVSQTEV RRFDEIYQSP TTGSFFDEEK PSKFAQALKE ASPDSFYPKQ YLAETDEGLK
EVS
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