| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1422 |
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| Symbol | |
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| ID | 4173562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1706883 |
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| End bp | 1708112 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638054432 |
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| Product | putative AcnD-accessory protein PrpF |
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| Protein accession | YP_660999 |
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| Protein GI | 109897744 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2828] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02334] probable AcnD-accessory protein PrpF |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTACTG AATCTAAAAC ACATCAGCCA CAAATCAAAA TCCCTGCGAC ATATATGCGC
GGAGGCACCA GTAAAGGGGT GTTCTTCGCT CTGAATGACT TACCAGAGGT GGCGCAAAAG
CCTGGCCCTG CAAGGGACAA CCTCTTACTG CGGGTGATTG GCAGCCCTGA TCCTTACGCT
AAGCAAACCG ACGGTATGGG CGGCGCAACG TCGAGTACCA GCAAAACGGT GATCCTGTCG
AAAAGCGATC GAGCCTGCCA CGATGTGAAT TATCTGTTCG GCCAAGTGGC TATCGATAAA
GCCTTTGTCG ATTGGAGCGG TAACTGCGGT AACTTAACGG CTGCTGTGGG CTCGTTTGCC
ATCAGCAATG GTTTGGTGAG CGCCAGCCGT ATTCCGCAAA ACGGCATTGC CGAGGTGCGT
ATTTGGCAGC AAAATATCCA GAAAACCATC ATCGCCCATG TGCCCATCAC CGATGGCGAA
GTACAAGAAA CCGGTGATTT TGAGTTAGAC GGTGTGACAT TTCCTGCAGC TGAAGTGTTG
ATAGAATTTA TGCACCCAGC GGATGACGGC GATGCGGCTG CCGAAGGCCC AAGTGGCATG
TTCCCCACAG GTAATATTGT GGATACCTTG GATTCACCTG AGCTGGCGGC TGTTGGGGTA
AACAACCTTA AAGCCACGTT AATCAATGCA GGTATTCCAA CGATTTTTGT AAACGCGGAA
GACATTGGTT ATACAGGCAC AGAATTGCAA GAGGTGATAA ACGGCGATCC CGCTGCACTG
ACCAAGTTTG AAACCATTCG CGCTCAAGGT GCTGTGCAAA TGGGGTTAAT CAAGGATATT
AGTGAAGCTG CGTCACGCCA GCATACGCCG AAAGTCGCGT TTGTAGCGCC GCCAACGCCT
TATGTGTCAT CCAGTGGCAA GGCCATTGAA CGTGATGACA TCGATGTATT GGTGCGGGCC
ATGTCGATGG GTAAATTGCA TCACGCCATG ATGGGCACGG CAGCCGTGGC CATTGGTACA
GCTGCAGCCA TACCAGGCAC ACTGGTAAAT TTAGCCGCGG GCGGTAACGA GCGCAGCGAT
GTGCGTTTCG GTCATCCGTC AGGCACCCTA AAAGTCGGCG CGGCTGCCGA GCAAGTGGAT
GGCCAATGGT CAGTGATAAA AGCGTCCATG AGTCGCAGTG CGCGTGTATT GATGGAAGGC
TGGGTGCGTA TCCCTAAAGA CAGCTTCTAA
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| Protein sequence | MATESKTHQP QIKIPATYMR GGTSKGVFFA LNDLPEVAQK PGPARDNLLL RVIGSPDPYA
KQTDGMGGAT SSTSKTVILS KSDRACHDVN YLFGQVAIDK AFVDWSGNCG NLTAAVGSFA
ISNGLVSASR IPQNGIAEVR IWQQNIQKTI IAHVPITDGE VQETGDFELD GVTFPAAEVL
IEFMHPADDG DAAAEGPSGM FPTGNIVDTL DSPELAAVGV NNLKATLINA GIPTIFVNAE
DIGYTGTELQ EVINGDPAAL TKFETIRAQG AVQMGLIKDI SEAASRQHTP KVAFVAPPTP
YVSSSGKAIE RDDIDVLVRA MSMGKLHHAM MGTAAVAIGT AAAIPGTLVN LAAGGNERSD
VRFGHPSGTL KVGAAAEQVD GQWSVIKASM SRSARVLMEG WVRIPKDSF
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