| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1408 |
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| Symbol | |
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| ID | 4173548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1691940 |
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| End bp | 1693760 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638054420 |
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| Product | acyl-CoA dehydrogenase-like |
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| Protein accession | YP_660987 |
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| Protein GI | 109897732 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGCAGT ACAAAGCGCC CGTAATGGAC ATGAAGTTTC TGGTTGAAGA CGTGTTCAAA
TATTATCAAC ATTATGAAAA ATACCCGGAG TTCGCTGAAG CAACCCCTGA TTTAGTGGAT
GCAATCCTGC AAGAATGCGC AAAATTCTGT GAAAACGAAT TACTGCCGCT AAACCAAAGC
GGTGATAAAG AGGGCTGTAA ATTCGATAAT GGTGTGGTGA CCACGCCAAC TGGCTTTAAA
GCGGCCTACA ACAAATACGT TGAAGGGGGA TGGCAGAGTT TATCTCACCC GGTTGAGCAT
GGTGGACAAG GCTTACCTCC TTCGCTGGGC ATGGCAAAAC AAGAAATGAT GGGCACGGCT
AACTGGTCTT GGGCCATGTA CCCGGGCCTG AGCCACGGAG CCATGAATAC GATCCAAAGC
CACGGCACAC AAGAACAAAA AGAGCTTTAC CTTACTCGCC TAACCGAAGG TACATGGACT
GGCACTATGT GCTTGACTGA GCCCCAATGT GGCACAGATT TGGGCCAAGT TAAAACCAAA
GCCATACCAA ATGATGACGG AACCTATGAC ATCGTGGGCA CCAAGATATT TATTTCTGCA
GGTGAGCACG ACCTAACTGA AAACATCATT CATATTGTGT TAGCTAGGTT GCCCGGTGCA
CCTGAAGGCA CGCGCGGCAT ATCGCTGTTT ATTGTGCCAA AAGTACAAGT TGATCAACAA
GGCAACTTAG GCGAAGGCAA CAAGGTCACG TGCGGTGCCA TTGAAGACAA AATGGGCATC
AAAGCATCGT CTACCGCCGT ACTGAATTTT GATAATGCAA AAGGTGTGTT AATCGGGCCA
GAAAATAAAG GCTTAGAATG CATGTTTACC TTTATGAATA CGGCTCGCGT AGGCACCGCG
CTGCAAGGTG TTTGCGCGTC TGAATTGGCT TACCAAAATT CCTTATTGTA TGCCAAAGAC
CGTTTATCTA TGCGAGCGCT AACCGGTAAA AAATGCCCAG ATAAAGTCGC CGATCCCATC
ATAGTGCACC CTGATGTGCG CAAAATGTTG ATGACCCAAA AAGCCATCTC TGAAGGTGGT
CGCGCGATGA TCTATTACAC CGCCAAAATA GTCGATGAAA TAGAAATGGC TAAGACTGAC
GCTGAGCGAG AAAAAGCGGA TGACAGGTTA GGCTTTATCA CTCCTATTCT TAAAGCGTTT
TTAACGGAAA TGGGCTGTGA AAGTACTAGC CAAGGCATGC AAATATTTGG CGGCCATGGC
TATATTAAAG AGTGGGGCAT GGAGCAAATC GTCCGTGATG TGCGTATCTC CACTTTGTAT
GAAGGCACTA CCGGCATTCA AGCCCTCGAT TTATTAGGCC GTAAAATACT GCTTACCCGT
GGCAAGTCAT TAAATGCGTT CAGTAAAGAA GTGCTGCTTT TCTGTAAAGA CAAAAGCATG
ATTTCTAAAA ACCCTCACAA GCGCCAAATG AACAAATTTA TTTGGGCACT AAGCAAGAAT
GTGGCGAACT GGCAGCAATA CACCATGCGC TTAGCGTTAA AAGCGAAAAA AGATCGCGAT
ATTGTTGGCT CAGCCTCAGT GGATTACCTC ATGTACTCAG GGTATATCAT GATGGCATAT
TTCTGGGCGC AGATGGCCCA AACCGCTTAT GAAAAGCTCG CGACCGACGT GGAAAATCGA
GATTTTTACC GGGCCAAAAT TAAAACCGCT GAATTTTATT TTGAGCGTTT ACTGCCCAGA
ACAAAATCAC TGGCCAAAAC CATGATGGCA GATCCAAAAA CGCTCATGCA ACTTGATCAA
GATTTGCTGT CTTTCTTGTA A
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| Protein sequence | MLQYKAPVMD MKFLVEDVFK YYQHYEKYPE FAEATPDLVD AILQECAKFC ENELLPLNQS
GDKEGCKFDN GVVTTPTGFK AAYNKYVEGG WQSLSHPVEH GGQGLPPSLG MAKQEMMGTA
NWSWAMYPGL SHGAMNTIQS HGTQEQKELY LTRLTEGTWT GTMCLTEPQC GTDLGQVKTK
AIPNDDGTYD IVGTKIFISA GEHDLTENII HIVLARLPGA PEGTRGISLF IVPKVQVDQQ
GNLGEGNKVT CGAIEDKMGI KASSTAVLNF DNAKGVLIGP ENKGLECMFT FMNTARVGTA
LQGVCASELA YQNSLLYAKD RLSMRALTGK KCPDKVADPI IVHPDVRKML MTQKAISEGG
RAMIYYTAKI VDEIEMAKTD AEREKADDRL GFITPILKAF LTEMGCESTS QGMQIFGGHG
YIKEWGMEQI VRDVRISTLY EGTTGIQALD LLGRKILLTR GKSLNAFSKE VLLFCKDKSM
ISKNPHKRQM NKFIWALSKN VANWQQYTMR LALKAKKDRD IVGSASVDYL MYSGYIMMAY
FWAQMAQTAY EKLATDVENR DFYRAKIKTA EFYFERLLPR TKSLAKTMMA DPKTLMQLDQ
DLLSFL
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