| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1404 |
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| Symbol | |
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| ID | 4173544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1686808 |
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| End bp | 1688181 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638054416 |
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| Product | cellulase |
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| Protein accession | YP_660983 |
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| Protein GI | 109897728 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2730] Endoglucanase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.690204 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACACG TGTTACGTAC ATCCACCAAA GACCGTTTAA AACGCACAAG CTTGCCTCTG
GCTATCATGT TAGGAGTAGC AATTATGAGT GAGGCCGCTG TACCTCCTCT TAATGTCAGT
GGGAATCAAA TTGTGACAGA TGGCGCCCCC GTGAGCTTTG CAGGTAACAG TCTATTTTGG
AGTAATACCG GTTGGGGTGG CGAGAAATTC TATACTGCGC AAGCCGTTGC GAATGCAAAA
TCAGAGTTTG GTGCGAACAT AATACGTGCC GCAATAGGCC ATGGTGTAAA TACGGCCGGT
AGCTTAAATT TTGACTGGGA CGGTAATATG AGTCGCTTGG ACACGGTCGT AAACGCCGCT
ATTGAGCAAG ATATGTATGT CATTATCGAC TTTCATAGTC ACGAGGCTCA TACAGACCAG
GCCACTGCAG TGAGGTTTTT CGAAGAAGTC GCCAATAAAT ATGGTACCTA CGACAACGTT
ATTTATGAAA TCTATAATGA GCCATTGCAG ATTTCATGGG CCAATGACAT TAAGCCTTAT
GCAGAAACGC TAATCGATAA AATACGTGCG ATTGATCCAA ATAGCCTGAT TGTGGTTGGC
ACGCCGACCT GGTCTCAAGA TGTTGATGTG GCCTCACAAG ATCCCATTGA TCGGGCGAAT
ATTGCCTATA CCCTTCACTT TTACGCTGGC ACGCACGGTG CGTCATTGCG CAATAAGGCA
CAAACGGCTT TAAATAACGG CATCGCACTC TTCGCCACAG AGTGGGGAAC TGTCAATGCT
GATGGCAATG GCGGCGTAAA TGCAAATGAA ACCGATGCAT GGATGGCTTT TTTCAAAGCA
AATAATATTA GCCACGCTAA TTGGGCGCTG AACGATAAAG ACGAAGGTGC TTCCACTTTT
ACGCCCGGCG GAAGCTGGAA TTCATTGACT GCCTCAGGCA CAAAGGTGAA GTCGATTATT
AAAGGGTGGA ACTCGAGTGT CGTAAATTTA GACAGTGATG GTGATGGAGT AAGTGACAGT
GATGATCAAT GTGATAACAC CCCCACAGGT ACAACAGTCG ATATTATTGG CTGTGCGATA
GCCGATTCCG ATGCTGACGG TGTAAGTGAT ATCACAGACC AGTGCCCCAA CACACCACAA
GGCACAAATG TAGATGCTAC TGGTTGCCCG CAAACAACAG GCAGTGGCAT CGATTGCAGT
GCAATAAATA GCTACCCTAA TTGGGTGCAA GCAGATTATC CCGGTGGCAC GAATAACCAC
AACGACACAG GTGACCAGAT GCAATACCAA GGCAATGCTT ATGAAGCAAA TTGGTACACT
AATAGTTTAC CAGGTAGCGA TTCATCATGG GTATTGCTAG GTAGCTGTGG TTAA
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| Protein sequence | MKHVLRTSTK DRLKRTSLPL AIMLGVAIMS EAAVPPLNVS GNQIVTDGAP VSFAGNSLFW
SNTGWGGEKF YTAQAVANAK SEFGANIIRA AIGHGVNTAG SLNFDWDGNM SRLDTVVNAA
IEQDMYVIID FHSHEAHTDQ ATAVRFFEEV ANKYGTYDNV IYEIYNEPLQ ISWANDIKPY
AETLIDKIRA IDPNSLIVVG TPTWSQDVDV ASQDPIDRAN IAYTLHFYAG THGASLRNKA
QTALNNGIAL FATEWGTVNA DGNGGVNANE TDAWMAFFKA NNISHANWAL NDKDEGASTF
TPGGSWNSLT ASGTKVKSII KGWNSSVVNL DSDGDGVSDS DDQCDNTPTG TTVDIIGCAI
ADSDADGVSD ITDQCPNTPQ GTNVDATGCP QTTGSGIDCS AINSYPNWVQ ADYPGGTNNH
NDTGDQMQYQ GNAYEANWYT NSLPGSDSSW VLLGSCG
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