Gene Patl_1403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1403 
Symbol 
ID4173543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1686071 
End bp1686385 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content44% 
IMG OID638054415 
Productsmall multidrug resistance protein 
Protein accessionYP_660982 
Protein GI109897727 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0526825 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTGGA TTATTTTGAT CATCGCAGGG TTATTCGAAG TTGTGTGGGC AATTGGCCTA 
AAATACAGTG ACGGTTTCAG CAAGCTGTGG CCTTCTATAT TCACTCTTGT TGCCATGGCC
ATCAGTTTTG GTTTATTAAG CATAGCCATG AAATCACTCC CAGCGGGAAC CGCGTATGCC
GTTTGGGTTG TTATCGGCCT CATAGGCACG GCGATTGTTG GTATTGTTAT GCTCAACGAG
CCGCTTAATT TTTGGCGAGT GGTTAGTTTA ATCACCATTA CGGTTGGCGT CATTGGATTG
AAACTAAGCA GTTAA
 
Protein sequence
MNWIILIIAG LFEVVWAIGL KYSDGFSKLW PSIFTLVAMA ISFGLLSIAM KSLPAGTAYA 
VWVVIGLIGT AIVGIVMLNE PLNFWRVVSL ITITVGVIGL KLSS