| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1401 |
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| Symbol | glpQ |
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| ID | 4173541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1684559 |
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| End bp | 1685548 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638054413 |
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| Product | glycerophosphodiester phosphodiesterase |
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| Protein accession | YP_660980 |
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| Protein GI | 109897725 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000351864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAA CAATTTTGTC GTTGTCATTG CTTGCGCTGC TGGCGAGCCA AGCCGCTTGG
GCTGAACCAT TGGTCATTGC TCATCGTGGT GCTTCGGGGT ATCTACCAGA ACACACCATG
GAGTCCACTA CTCTCGCCTT CGCCCTTGGG GCAGACTTTA TTGAGCAAGA CGTAGTGATA
AGCAAAGATG GCGTGCCAGT CGTACTGCAT GATATTCACT TAGATACAGT GACAAACGTT
GCTGATAAAT ACCCACAGCG AAAACGTGAT GACGGGCGTT TCTATGCCCT TGATTTTACC
TTAACAGAAT TAAAGTCTTT AAAAGTGCAT GAGCGCAGCA CAACAGATGG CAAACAGATT
TTCAAAAACC GCTATCAAGG CAACGCTGAA TTTACCATTG CGACCTTTGA AGAACAGATT
GAGCTGATTA ATCAACTTAA CCGGCAATTT GGCAAGAACA TTGGTTTTTA CCCTGAGATA
AAATCCCCTG CTTGGCACCG GGAACAAGGC GTGGATATCA GCAAAATTGT TATGAAAACC
CTGCGCAAAC ATAGCCTTGA TGATGCTAGT AAAGCCATTT ATGTGCAGTG TTTCGATTAT
GCTGAGCTGA AACGTTTGCG CCATGAATTG GGCGCAAAAG TAAAATTGAT TCAGTTGCTA
GGTGAAAATG ATTGGGGGGA ATCCCCCACT GATTATGATG CTCTGCGCAC GTCTGAAAAA
CTCGAAGAGT TAGCCACAAT CGCTCAAGGT ATAGGCCCAT GGATCCCTCA GTTGGTTGAT
ATGCAGACCC TACAACCCAC GGGATTGGTC AAACGCGCAC ATGATGCAGG GCTTGACGTG
CACCCATATA CGTTTAGGCA AGACGCGCTG CCAAAAGGCG TAACCAATAA ACAAACGCTG
GACTTATTGT TTAAACAGCT AAAAGTGGAC GGCTTGTTTA CTGATTTTAC CGACACAGTC
GTGACGTATT TAGACCAACA ACCCCGCTAA
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| Protein sequence | MKKTILSLSL LALLASQAAW AEPLVIAHRG ASGYLPEHTM ESTTLAFALG ADFIEQDVVI
SKDGVPVVLH DIHLDTVTNV ADKYPQRKRD DGRFYALDFT LTELKSLKVH ERSTTDGKQI
FKNRYQGNAE FTIATFEEQI ELINQLNRQF GKNIGFYPEI KSPAWHREQG VDISKIVMKT
LRKHSLDDAS KAIYVQCFDY AELKRLRHEL GAKVKLIQLL GENDWGESPT DYDALRTSEK
LEELATIAQG IGPWIPQLVD MQTLQPTGLV KRAHDAGLDV HPYTFRQDAL PKGVTNKQTL
DLLFKQLKVD GLFTDFTDTV VTYLDQQPR
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