| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1396 |
|---|
| Symbol | |
|---|
| ID | 4173536 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | + |
|---|
| Start bp | 1681020 |
|---|
| End bp | 1681349 |
|---|
| Gene Length | 330 bp |
|---|
| Protein Length | 109 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638054408 |
|---|
| Product | glutaredoxin-like protein |
|---|
| Protein accession | YP_660975 |
|---|
| Protein GI | 109897720 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0278] Glutaredoxin-related protein |
|---|
| TIGRFAM ID | [TIGR00365] monothiol glutaredoxin, Grx4 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.420177 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACAG TTGAAAAAAT TCAGCAACAA ATCAGTGAAA ACCCCATTCT TCTTTATATG
AAAGGGTCAC CTAAATTGCC TAACTGTGGC TTTTCAGCTC AGGCATCACA GGCATTGATG
TCTTGTGGCG AAGAGTTTGC TTACGTTGAT ATTCTGCAAA ACCCTGACAT TCGTTCAGAA
TTGCCAAAAT ACGCTGACTG GCCTACTTTT CCACAGTTGT GGATCGACGG TGAGCTTATT
GGTGGTTGTG ACATCATCAT GGAAATGGTT CAGCAGGGCG AATTGCAAAC AATCGTTAAA
GAAAGCGCTG AAAAACGCGC TGATAAGTAA
|
|---|
| Protein sequence | METVEKIQQQ ISENPILLYM KGSPKLPNCG FSAQASQALM SCGEEFAYVD ILQNPDIRSE
LPKYADWPTF PQLWIDGELI GGCDIIMEMV QQGELQTIVK ESAEKRADK
|
|---|
| |