| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1393 |
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| Symbol | |
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| ID | 4173533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1676625 |
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| End bp | 1677908 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638054405 |
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| Product | hypothetical protein |
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| Protein accession | YP_660972 |
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| Protein GI | 109897717 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2718] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCATT TTATTGATCG ACGGCTCAAC GGCAAAGGAA AAAGTACAGT CAACCGCCAA
CGTTTCCTGC GCCGTTACAA GGAGCAAATT AAGAAGGCGG TGTCTGATTC AATCAACAAA
CGCAGTGTCA CCGACGTGAC CAGTGGTGAA AAAATCGGCA TTTCCAGCCG AGATATATCT
GAACCAATTT TTCATACAGG TAAAGGGGGT GCCAGAAGCA TCGTGCATCC CGGCAATGAT
CAATTCACCG CGGGGGATAA GATCAAACGC CCCGATTCGG GTGCAGGACA AGGCGGGGAT
AGCAACGCCA GTGATAGCGG TGAGGGACAA GACGACTTTG TTTTTCAAAT TTCAAAAGAC
GAATATCTAG ATCTTCTTTT TGAAAATCTG ATCCTGCCGA ATCTCGAGAA AACACAGCAG
GATAAACTGG TTGAATATGA AAGCTATCGA GCGGGATTTG TATCAGACGG TGTCCCGAGT
AATTTAGATG TAGTGCGATC TTTAAAAGGG TCGGTAGCTC GACGCATCGC CCTCAGTGCC
GGTAAAAAAG CGCAATTAAA GTTACTGCAA GCGCAGCTTG CTGAAGCCCT CGAATCTAGT
CTGCCTGATC AACATATGCT GGCAAAGCTA AAAGAAGAGA TAACGCAGTT GGAAAAGGCG
ATTGCTCGCG TGCCCTTCAT CGATACCTTC GACCTGCGCT TTCGCAATTA TCAAAAACGC
CCCATACCTT CAAGCAAAGC CGTTATGTTT TGCCTAATGG ATGTGTCGGG TTCAATGGAC
CAAGCCACCA AAGACAAAGC CAAACGATTC TATATCTTGC TGTATTTATT CTTAACACGC
ACCTACAAGG ACGTCGAGGT CGTCTATATA CATCACCACA CTCAAGCCAA AGAGGTCGAC
GAACAAGAAT TTTTTTATTC AACAGAAACC GGCGGCACGA TTGTATCAAG TGCCTTAGTA
TTGATGAAGC AAATCATAGA GCAGCGTTTC TCTCGTCATG AGTGGAATAT ATACGCAGCA
CAGGCATCTG ATGGAGATAA CTGGACAGAC GATTGCGCCA AGTGCACTGA ATTACTCGAG
AAGAGCTTGC TGCCTGCGGT GCGTTACTTC GCTTATATCG AAATTACTGC ACGTCAACAT
CAAAAGCTCT GGCATGAATA TGAAAAGCTC AGCGAAACCC ATAATAATTT TGCCATTAAG
CATATTGTTG ATGTTGATGA CATTTACCCA GTTTTCAGGG AGCTGTTCGA CCAAGGCATA
GAAAAACAAT CAGGAGTGGC TTAG
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| Protein sequence | MAHFIDRRLN GKGKSTVNRQ RFLRRYKEQI KKAVSDSINK RSVTDVTSGE KIGISSRDIS
EPIFHTGKGG ARSIVHPGND QFTAGDKIKR PDSGAGQGGD SNASDSGEGQ DDFVFQISKD
EYLDLLFENL ILPNLEKTQQ DKLVEYESYR AGFVSDGVPS NLDVVRSLKG SVARRIALSA
GKKAQLKLLQ AQLAEALESS LPDQHMLAKL KEEITQLEKA IARVPFIDTF DLRFRNYQKR
PIPSSKAVMF CLMDVSGSMD QATKDKAKRF YILLYLFLTR TYKDVEVVYI HHHTQAKEVD
EQEFFYSTET GGTIVSSALV LMKQIIEQRF SRHEWNIYAA QASDGDNWTD DCAKCTELLE
KSLLPAVRYF AYIEITARQH QKLWHEYEKL SETHNNFAIK HIVDVDDIYP VFRELFDQGI
EKQSGVA
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