Gene Patl_1378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1378 
Symbol 
ID4171875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1662178 
End bp1662579 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content43% 
IMG OID638054391 
ProductBLUF domain-containing protein 
Protein accessionYP_660958 
Protein GI109897703 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCAAT TGATTTACGT AAGCGATTTT GCAAAATCGC TCGATGAAAA CGATTTGCAA 
GACATCCTTA TCTCAGCCAG AGCAATCAAT AGTGAGCAGG GGATAAGCGG TAAGCTGATT
ACGGTGTCTC GCCACTTTTT TCAGGTGATT GAAGGTGATG AAGTGAAGGT TAATCAGCTG
TATGCCAAAA TAAAGCAGGA TCCTCGGCAT AAAAATGTTC GCTTGGTGAT GACGAAAAGC
ACTGGTATAC GTGAGTTTGG TGACTGGACT ATGGGGTTCT CGAGTTTACT CGAATCCCAG
CAAGAGCAAG ATGCGGCTTT TATACTCAGT GATTTTGCCA AACGCGAAAA CTTCTCGCCA
GAACATCACA GTGGCATCGG GTTATTACTC AAGCAGGTAT AA
 
Protein sequence
MFQLIYVSDF AKSLDENDLQ DILISARAIN SEQGISGKLI TVSRHFFQVI EGDEVKVNQL 
YAKIKQDPRH KNVRLVMTKS TGIREFGDWT MGFSSLLESQ QEQDAAFILS DFAKRENFSP
EHHSGIGLLL KQV