| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1376 |
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| Symbol | |
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| ID | 4171873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1658989 |
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| End bp | 1660320 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638054389 |
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| Product | Na+/H+ antiporter NhaC |
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| Protein accession | YP_660956 |
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| Protein GI | 109897701 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1757] Na+/H+ antiporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACCTC CTTCACCTTC GTTAAATCCT TATTCGACTA GCGCTAAACT CGCGCTATTG
CCACTGCTCA CCTTCTTGGT GCTGTTTTTG GGTGTCGGCT TTTATTATCA GGCGCAAGGC
GTGGAGTATG CTTTTTATCA GTTGCCCTCC CCGTCAGCAT TGCTGCCTGC GGTGATACTC
GCTGTATTGC TGTCAAAGGA ACCCCTTACC CAAACCATGG CGCGATACGT CGAAGGAGCG
GGTCACAGCA ATATTATCAC CATGTGTTTT ATCTATTTAT TAGCGGGTGC GTTTTCCGCC
GTGGCTAAAG CCACTGGGGG AGTAGACGCA ACGGTAAGCG TAGGGCTGAG TATTATTCCT
GCCCAATTTA TCTTGCCTGG GTTGTTTTTA ATCGCGGGCT TTATTGCCAC CGCTATGGGC
ACATCTATGG GCACACTTGC AGCCCTTGGC CCAGTGGGGT TGGGCGTGGC CCAAGCCACT
GGTATCGAGC CCGCTTTGGT GGCAGGCGTA TTGGTCAGCG GCGCGATATT TGGCGATAAC
CTATCAATCA TTTCTGATAC CACTATCGCC GCAACACGCA CACAAGGCTG TGAAATGCGC
GATAAATTCA AGGCTAATTT ACATCTCGCT TTACCGGCTG CCCTGATTGT CATCGTGCTA
CTGGTCATAT TAGGCGAAAC TGGCGAAGCA AATATCCCCC AAGGCACCAA CGGCTGGCTA
GCCCTGCCCT ATGTACTGAT TTTAGTGTTG GCGGTTGCCG GGGTAAATGT GTTCGCAGTG
CTGGTGATTG GTATCTTGTC TAGCGCAATT ATTGGTATGA GTATCACTGA TTACCAACTG
GTTTCTGTGG GGCAAGATGT ATATGCCGGT TTTGGCCAAA TGCAGGAGAT TATGATCTTG
TCGCTGATGC TCGGCGGATT ATCCGAACTC ATGCGCCAAC AAGGGGGGAT CGATTTCTTG
CTAGCGTCCA TCAGCAAGCT TATTCGCGCT TTATCGTTAC CCATTAAAAT TGGCAACTCG
TTAGGTATCG CGGTACTTAT CAGCGCCTTA AATGTCTGTA TTGCCAATAA TACCGTATCG
ATTATTGTCG CCGGTAGCAC GGCGAAAGCA CTCGCAGAAC AAGGCGGTAT TGAGCCCAAG
CGCAGTGCCA GCCTGCTTGA TATTTTTGCT TGTGTCGTAC AAGGGCTAAT CCCTTACGGC
GGGCAGTTAT TGATTATTGG CGCAACGTTT TCACTGTCGC CAGTAGACGT CATCCCCTAT
TCGTTTTACT GCTTTATTCT TGCTGGTGTC ACCTTACTAA GCTTTATTTG GCGCGCTAAA
AAAGCACGCT AA
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| Protein sequence | MQPPSPSLNP YSTSAKLALL PLLTFLVLFL GVGFYYQAQG VEYAFYQLPS PSALLPAVIL
AVLLSKEPLT QTMARYVEGA GHSNIITMCF IYLLAGAFSA VAKATGGVDA TVSVGLSIIP
AQFILPGLFL IAGFIATAMG TSMGTLAALG PVGLGVAQAT GIEPALVAGV LVSGAIFGDN
LSIISDTTIA ATRTQGCEMR DKFKANLHLA LPAALIVIVL LVILGETGEA NIPQGTNGWL
ALPYVLILVL AVAGVNVFAV LVIGILSSAI IGMSITDYQL VSVGQDVYAG FGQMQEIMIL
SLMLGGLSEL MRQQGGIDFL LASISKLIRA LSLPIKIGNS LGIAVLISAL NVCIANNTVS
IIVAGSTAKA LAEQGGIEPK RSASLLDIFA CVVQGLIPYG GQLLIIGATF SLSPVDVIPY
SFYCFILAGV TLLSFIWRAK KAR
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