| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1371 |
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| Symbol | |
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| ID | 4171868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1652457 |
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| End bp | 1654505 |
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| Gene Length | 2049 bp |
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| Protein Length | 682 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638054384 |
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| Product | NADH:flavin oxidoreductase/NADH oxidase |
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| Protein accession | YP_660951 |
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| Protein GI | 109897696 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases
[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0728118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACAT CAACAGCAAA TCTAGCAGGC GCTAGTGTAT ATCCAAATCT TCTTAAGCCA
CTGGATTTAG GCTTCACGAA ATTAAGAAAC CGTGTATTGA TGGGCTCAAT GCATACTGGC
CTCGAAGAAG CGCCTAACGG CCATGAACGC ATGGCGAAGT TTTTCGCTGA ACGTGCCAGA
GGTGGTGTGG GCCTAATCGT GACTGGTGGC ATCGGCCCCA ACGATGAGGG CGCAACACAC
CAAAATACCA AACGCTTGAG CAACGATAAA GAAGTGGCTC ACCATAAAGT CATCACGGAT
GCGGTGCACA ACGAAGGCGG CAAAATCTGT ATGCAAATTC TGCACACCGG TCGTTACGCT
TACAACCCGA ATTTGGTTGC GCCTTCGGCG GTGCAAGCGC CTATTAATCC ATTTAAGCCT
AAGGCTTTAG ATGACGATGG GATCGAAAAA CAGATAGAAG ATTTCATTTT CACCTCAACT
CAGGCGCAAA AAGCCGGTTA TGATGGTGTT GAAATCATGG GTTCTGAAGG ATATTTTTTA
AACCAATTCA TTGCTGCTCG TACTAACCAA CGTGACGACG AGTGGGGTGG TAGTTACGAA
AACCGCATTA AATTACCCCT TGAAGTCGTG CGCCGTGTAC GTGAAGCCGT AGGTGAGAAA
TTCATTATTA TTTACCGCTT ATCAATGCTT GATTTGGTGG AAGGTGGTTC CACCTATAAA
GAAGTGGTTG AGCTAGGTAA GTTGATTGAA AAAGCCGGTG CAACCATCAT TAATACGGGT
ATTGGCTGGC ACGAAGCACG AATTCCTACC ATAGCAACCA AAGTCCCACG TGCTGCATTT
ACTTGGGTGA CAGCAAAATT CCGCGAATCA TTGTCTATTC CGGTTATCAC GTCGAATCGT
ATTAACACCC CTGAAGTGGC TGAGCAAGTG CTTGCCCGAG GCGATGCTGA TATGGTGTCT
ATGGCGCGCC CGTTTTTAGC CGACCCTGAT TTTGTTATTA AGGCTATCGA AAACCGCTCT
GATGAAATCA ATACCTGTAT CGGTTGTAAC CAGGCCTGCT TGGATCACGT GTTTGAAGGC
AAGATGACCA GTTGTTTGGT TAACCCTAGA GCCTGCCATG AAACAGAGTT AAATATACTC
CCCACACAAG CGGCCAAGAA AATTGCCGTT ATTGGCGCTG GCCCTGCAGG GCTTGCAGCG
GCTAAAACCG CAGCTGAGCG AGGTCATTCG GTGACCTTGT TTGATTCTGC CGATGAGCTA
GGTGGGCAAT TCAATATTGC TAAGCAAGTG CCGGGCAAAG AAGAGTTTTA TGAGACCATT
CGGTACTTTA AACGTCAGCT CGAATTACAC AATGTGACCG TTAAGCTCAA TACACGCGTC
AGCGCAAGTG ACTTAAACGA TAGCGATTTT GATGACGTGA TTGTGGCTAC GGGTATTGAG
CCACGCACAC CACCGATTGA AGGTATCGAC CATGCGAAAG TCATGACCTA CATTGAAGTC
ATTAAAGAGC ACAAACCGGT AGGCAAAAAA GTGGCTGTGA TCGGCGCTGG TGGTATTGGT
TTTGACGTAT CTGAGTTTTT ATCCCACTCG GGCGAGTCAA CTAGCTTGAA TATTTCTGCC
TTTATGAAAG AGTGGGGCAT TGATATGACC TTTTCTTCTC GTGGCGGTAT TGAAGGTGTT
AAACCCCAAC CAACACCTTC GCCACGAGAA ATTTTCTTAC TACAGCGTAA AACCACCAAA
GTAGGCGCAG GTCTGGGTAA AACCACGGGG TGGGCACATC GTGTTGGTTT GCTGAGTAAA
GGCGTGAGCA TGGTTGCCGG TTGTGAATAC TTGAAAATTG ATGACCAAGG TATTCATATT
AAAGTGAATG AAGAGGTGCA AGTGCTGGAC GTAGATAACG TTATTATTTG TGCCGGCCAA
GAGCCACTGC GAGAATTAGT GGAAGGTTTA ACCAAGCCTT ATCATCTAAT CGGTGGTGCT
GATGTCGCTG CGGAGCTTGA TGCGAAACGC GCAATCGATC AAGGTACTCG TTTAGCGGCT
GCATTGTAA
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| Protein sequence | MTTSTANLAG ASVYPNLLKP LDLGFTKLRN RVLMGSMHTG LEEAPNGHER MAKFFAERAR
GGVGLIVTGG IGPNDEGATH QNTKRLSNDK EVAHHKVITD AVHNEGGKIC MQILHTGRYA
YNPNLVAPSA VQAPINPFKP KALDDDGIEK QIEDFIFTST QAQKAGYDGV EIMGSEGYFL
NQFIAARTNQ RDDEWGGSYE NRIKLPLEVV RRVREAVGEK FIIIYRLSML DLVEGGSTYK
EVVELGKLIE KAGATIINTG IGWHEARIPT IATKVPRAAF TWVTAKFRES LSIPVITSNR
INTPEVAEQV LARGDADMVS MARPFLADPD FVIKAIENRS DEINTCIGCN QACLDHVFEG
KMTSCLVNPR ACHETELNIL PTQAAKKIAV IGAGPAGLAA AKTAAERGHS VTLFDSADEL
GGQFNIAKQV PGKEEFYETI RYFKRQLELH NVTVKLNTRV SASDLNDSDF DDVIVATGIE
PRTPPIEGID HAKVMTYIEV IKEHKPVGKK VAVIGAGGIG FDVSEFLSHS GESTSLNISA
FMKEWGIDMT FSSRGGIEGV KPQPTPSPRE IFLLQRKTTK VGAGLGKTTG WAHRVGLLSK
GVSMVAGCEY LKIDDQGIHI KVNEEVQVLD VDNVIICAGQ EPLRELVEGL TKPYHLIGGA
DVAAELDAKR AIDQGTRLAA AL
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