| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1362 |
|---|
| Symbol | |
|---|
| ID | 4171859 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 1638319 |
|---|
| End bp | 1639203 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638054375 |
|---|
| Product | 2-dehydropantoate 2-reductase |
|---|
| Protein accession | YP_660942 |
|---|
| Protein GI | 109897687 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1893] Ketopantoate reductase |
|---|
| TIGRFAM ID | [TIGR00745] 2-dehydropantoate 2-reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.274866 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTGG CGATTTTGGG TAATGGCGCT ATCGGTAATT TACTGATGCT TAAATGTTAT
CAAATACAGC AAGATGTTGG TGTCTTCATG CGCTCCCAGC AGCACTTTAC ACTTACCGCA
ACCGACATTG AGCATCGGGT CCATCAAATT AACATCGACT CATTTGCACG CTCCAGCCTG
AACGAATTTA ATCTGCTGAT TATTCCGGTA AAGGCCTATC AGGTAGAGGA TGCGCTCAAG
CAGTTGCAAG CAGATTTAAC ACCTGTGCAA ACGATTGTGT TGCTGCACAA TGGTATGGGG
GTGATTGAGA GTGCAAAAGC ACTGCTGCCT TATAATCCAA TTATCGCAGC AACCACTAGT
CACGCTGCCT ATAAGCCAGA TGCGCAGAGT GTGACTGAAA CGGGGTTGGG AGTTTGTCAT
TTAGGCTATC TACAACATTC AGAAGCGACT GACTCTGAAA AAATCCACAA CATATTAAAC
CGTCTTTTAG GCCCATGCAC CTGGCACCAA AGCATCGAAC AAGCCCTGTG GGACAAGCTT
GCGATTAATG CAGCAATCAA CCCATTGACT GCCATTCACA GGGTCAAAAA TGGTCAGTTA
ACCGAGTTGA AATACCGCGC TGATATTGAA AGAATTTGTG CTGAAACAGT AAGCGTGATG
ACAGCAAGTG GATTTCATGC AGATGAAAGT GAACTGGTTG AAAAGGTGCT TGATGTGGCT
AACGCCACCG CTGAAAACTA CTCATCTATG TATCAAGATA TTGCTCATCA TCGTCTAAGC
GAAATTGCTT TTATCAACGG GTACATATGC CAGGAAGCCC AAAAACAGGG ATTAGACGCG
CCATTTAATA CTGAGTTGGT TAACAAAATA AACGCCTTAG CATAG
|
|---|
| Protein sequence | MKVAILGNGA IGNLLMLKCY QIQQDVGVFM RSQQHFTLTA TDIEHRVHQI NIDSFARSSL
NEFNLLIIPV KAYQVEDALK QLQADLTPVQ TIVLLHNGMG VIESAKALLP YNPIIAATTS
HAAYKPDAQS VTETGLGVCH LGYLQHSEAT DSEKIHNILN RLLGPCTWHQ SIEQALWDKL
AINAAINPLT AIHRVKNGQL TELKYRADIE RICAETVSVM TASGFHADES ELVEKVLDVA
NATAENYSSM YQDIAHHRLS EIAFINGYIC QEAQKQGLDA PFNTELVNKI NALA
|
|---|
| |