| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1358 |
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| Symbol | prfC |
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| ID | 4171855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1631882 |
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| End bp | 1633468 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638054371 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_660938 |
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| Protein GI | 109897683 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAACG CTTTAGTCCC GCAAGAAGTC TCACGCAGAC GTACTTTTGC TATTATTTCT
CACCCGGATG CGGGTAAAAC CACCATTACA GAAAAAGTAT TATTGTTCGG AAATGCCTTA
CAACGTGCCG GTACCGTTAA AGGTAAGAAG TCTGGACAGC ATGCTAAGTC TGACTGGATG
GAGATGGAAA AAGAAAGGGG CATCTCTGTC ACTACGTCCG TGATGCAATT TCCTTATTCT
GATTGCTTGG TGAATTTGCT TGACACCCCA GGTCACGAAG ATTTCTCAGA AGATACCTAC
CGTACACTAA CCGCTGTTGA TTCCTGCTTG ATGGTAATTG ATGCTGCTAA AGGGGTAGAG
GCACGTACGA TTAAGTTGAT GGAAGTCACT CGCTTGCGCG ATACGCCGAT CATCACCTTT
ATGAACAAGC TCGACCGCGA TACGCGTGAT CCTATCGACT TATTGGACGA AGTGGAAAGC
GTACTGAATA TCAAATGCGC TCCCATCACT TGGCCTATTG GAATGGGTAA AGAATTTAAA
GGTGTGTACC ATTTGTTGCG TGATGAAACC ATTCTGTACA GTACGGGGCA AGGCCATACC
ATTCAGGAAA AACGCGTTAT CAAAGGGTTA GATAACCCAG AACTTGATAC TGCCATAGGC
GATTACGCAG AAGAGTTGCG TGATATGCTG GATTTGGTTA AAGGTGCATC TCACGAGTTC
AATCATGAAG AATTTATTGC CGGTGAATTA ACCCCTGTAT TCTTTGGTAC AGCGATGGGT
AATTTTGGTG TGGATCACAT GCTAGATGGT CTGGTTGATT GGGCTCCTTC TCCGCAAGGA
CGTGAAACTG ACCAAGGTAA AGTGGAAGCA AAAGACGAAA AATTCAGTGG TTTCGTGTTT
AAAATACAGG CCAATATGGA TCCCAAGCAT CGAGATCGTA TTGCGTTTTG CCGGATCGTG
TCAGGTAAAT ATCAAAAGGG TATGAAAATG CATCAAAGCC GTATCGGTAA AGATGTGCGT
ATTTCTGATG CCTTAACGTT TTTAGCGGGC GACCGAGAGC TTCTTGAAGA AGCATACGCG
GGCGATATCA TTGGTTTACA TAATCATGGC TCTATTCAAA TTGGCGATAC CTTTACTTCA
GGTGACAAGT TCCGTTTTGC CGGCATCCCT AATTTCGCTC CAGAGTTATT CAAGCGAATT
CGTCTGCGCG ATCCGCTTAA GCAAAAGCAA TTACTTAAGG GCTTGATCCA GTTATCTGAA
GAAGGTGCGG TGCAAGTATT TAGACCATTG CAAAACAACG ATTTGATTGT GGGCGCCGTA
GGTGTGTTGC AGTTCGATGT GGTGGTTGCA CGACTTAAAG GCGAATACAA TGTTGATGCT
ATGTATGAGC ATATTAATGT GGCGACAGCT CGCTGGATTT ATGGCAAAGA CGAGCGAAAA
GTGGATGAGT TTAGGCGTAA AGCTGAAGCC AATTTAGCCC TCGATGGTGG TGACAATCTA
ACTTACATCG CTCCGACTAT GGTCAACTTG TCGTTAGCCC AAGAGCGGTA CCCAGAGATT
GAGTTCCATC AAACTCGCGA GCATTAA
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| Protein sequence | MSNALVPQEV SRRRTFAIIS HPDAGKTTIT EKVLLFGNAL QRAGTVKGKK SGQHAKSDWM
EMEKERGISV TTSVMQFPYS DCLVNLLDTP GHEDFSEDTY RTLTAVDSCL MVIDAAKGVE
ARTIKLMEVT RLRDTPIITF MNKLDRDTRD PIDLLDEVES VLNIKCAPIT WPIGMGKEFK
GVYHLLRDET ILYSTGQGHT IQEKRVIKGL DNPELDTAIG DYAEELRDML DLVKGASHEF
NHEEFIAGEL TPVFFGTAMG NFGVDHMLDG LVDWAPSPQG RETDQGKVEA KDEKFSGFVF
KIQANMDPKH RDRIAFCRIV SGKYQKGMKM HQSRIGKDVR ISDALTFLAG DRELLEEAYA
GDIIGLHNHG SIQIGDTFTS GDKFRFAGIP NFAPELFKRI RLRDPLKQKQ LLKGLIQLSE
EGAVQVFRPL QNNDLIVGAV GVLQFDVVVA RLKGEYNVDA MYEHINVATA RWIYGKDERK
VDEFRRKAEA NLALDGGDNL TYIAPTMVNL SLAQERYPEI EFHQTREH
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