| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1356 |
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| Symbol | |
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| ID | 4171853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1629528 |
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| End bp | 1630433 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638054369 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_660936 |
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| Protein GI | 109897681 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATATTG AACACCTCAA GCTTTTCGTG CGTATCGCCA GAACCTGCAA CATCAGTGCA
GCGGGCCAAG AACAGGACTT ATCACCTGCC GTAGCAAGCG CTTATATAAG CAAACTTGAA
GATAACTTAG GTGTTCGCCT TGTACATCGA ACCACCCGCA AGGTGTCATT AACTGAAGAA
GGTGAAGCGT TTTTACCTCA TGCAGAAGAA ATACTCACGA ATATAGAAAC CGCGCGGGCT
TCTGTGGGAG ATGGAGAGCA CAACCCAAAA GGTGTGTTGA GAGTCACGGC TCCGGCCTCT
TTCGGGCGGA TGCATATTGT TCCCGCATTG GATGAATTTT TAGCGCGCTA TCCAGATTTA
TCAGTGGATT TTCGCTTTAA CGACTCGATA GTCGATTTAG TTGAAGGTGG CTTTGATATT
GCGATACGTG ATGCTGCTTT AAAAGACTCA AATTTGTTTG CACGCAAACT CGCGCCAGAT
CGCCGTATTA TTTGCGCTTC GCCAAAGTAC ATAAAAAGCC ATGGCGCCCC TAAAATCCCT
CAAGATATAG ACGCACATCA GTGCGTTAAT CTAATGGGGT TAGACACTTG GGATTTTGAA
ACAGATAAAG GCTCGGTGAG TATTAAAGCA ACGGGTAGAA TCCGTATTGA TAATGGTGAG
GCAGTACGAG ACGCTGCCAT TGAAGGCTCA GGCCTTGTTA TGTCATCTAT CTGGTGTGTC
TATCAGGCTT TGCAATCTGG GCAATTAGTT CAAGTGTTAG AAGATTACCC CATGGTATCC
AAAACGGCGA TTTGGGCAGT TTACCCGAGT AATCGCCAGT TAGCGCCAAA GGTGCGCGCT
TTCATTGATT TCTTCTTGGC ATATTATGGG CAAACCCCTT ATTGGGAGCG AGCGTTGCAA
AAGTAG
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| Protein sequence | MNIEHLKLFV RIARTCNISA AGQEQDLSPA VASAYISKLE DNLGVRLVHR TTRKVSLTEE
GEAFLPHAEE ILTNIETARA SVGDGEHNPK GVLRVTAPAS FGRMHIVPAL DEFLARYPDL
SVDFRFNDSI VDLVEGGFDI AIRDAALKDS NLFARKLAPD RRIICASPKY IKSHGAPKIP
QDIDAHQCVN LMGLDTWDFE TDKGSVSIKA TGRIRIDNGE AVRDAAIEGS GLVMSSIWCV
YQALQSGQLV QVLEDYPMVS KTAIWAVYPS NRQLAPKVRA FIDFFLAYYG QTPYWERALQ
K
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