| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1351 |
|---|
| Symbol | |
|---|
| ID | 4171848 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 1625431 |
|---|
| End bp | 1626216 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638054364 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_660931 |
|---|
| Protein GI | 109897676 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.450621 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TTATTTTGGC CGTTGGTTTT TCACTTTTTT CAGTTGTTGC TAATAGCTCT
TTTGATAATA AAAATGAATA CATTAACTAT AATCCCCAAA TACCAATTAA TACCGTTCGT
AACTTTTCAT TAATTCTAGA TGAGTTAGCA AACAACTCAC CTATAAATGC TATGATCAGC
GTTAAAATGA AATCACCTGT CGTTGCTATG GTGAGCGGTA AAATGAAACC ACCAGTTATC
GCCATGACCA GCAGCAAAAT GAAGCCACCT GTCGTTGCTA TGGTGAGCGA TAAAATGAAA
CCACCAGTTA TCGCCATGAC CAGCAGCAAA ATGAAGCCAC CTGTCGTTGC TATGGTGAGC
GGTAAAATGA AACCACCAGT TATCGCCATG ACCAGCAGCA AAATGAAGCC ACCTGTCGTT
GCTATGGTGA GCGGTAAAAT GAAACCACCA GTTATCGCCA TGACCAGCAG CAAAATGAAG
CCACCTGTCG TTGCTATGGT GAGCGGTAAA ATGAAACCAC CAGTTATCGC CATGACCAGC
AGCAAAATGA AGCCACTTGT CGTTGCTATG GTGAGCGGTA AAATGAAACC GCCTGTCATT
GCTATGGTGA GCGGTAAAAT GAAACCACCA GTCATTGCTA TGGTGAGCGG TAAAATGAAA
CCACCTGTCA TTGCTATGGT GAGCGGTAAA ATGAAACCGC CTGTCGTCGC CATGACCAGC
AGTAAAATGA AGCCGCCCGT TATTGCTATG AATACAGGTA AAAGTAAGCC GCCTGTTCTT
GCCTAA
|
|---|
| Protein sequence | MKKIILAVGF SLFSVVANSS FDNKNEYINY NPQIPINTVR NFSLILDELA NNSPINAMIS
VKMKSPVVAM VSGKMKPPVI AMTSSKMKPP VVAMVSDKMK PPVIAMTSSK MKPPVVAMVS
GKMKPPVIAM TSSKMKPPVV AMVSGKMKPP VIAMTSSKMK PPVVAMVSGK MKPPVIAMTS
SKMKPLVVAM VSGKMKPPVI AMVSGKMKPP VIAMVSGKMK PPVIAMVSGK MKPPVVAMTS
SKMKPPVIAM NTGKSKPPVL A
|
|---|
| |