Gene Patl_1350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1350 
Symbol 
ID4171847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1624890 
End bp1625144 
Gene Length255 bp 
Protein Length84 aa 
Translation table11 
GC content39% 
IMG OID638054363 
ProductXRE family transcriptional regulator 
Protein accessionYP_660930 
Protein GI109897675 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.98003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATATCA CAGGTGCAGA TCTAAGAAAA ATGAGACAAG ACGCTGGCTT AACCACGGTT 
AAAATGGCAA AGCTTGCTAA CGTTAAAACA CGTAAAACCT ATGAAAACTG GGAAAAAGAA
ATTGGTAGCC CTAGCATGAA TCAGTTCATT GCCATGTGCG TAGGTTGTAA CTACAACTCA
TCTAAGTTTG TTAAGCTAGC GATCGAACGT CAAGATCCTA CTCAACAGTT AAACATTTCT
TCAGCTCGTA GATAA
 
Protein sequence
MYITGADLRK MRQDAGLTTV KMAKLANVKT RKTYENWEKE IGSPSMNQFI AMCVGCNYNS 
SKFVKLAIER QDPTQQLNIS SARR