Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1347 |
Symbol | |
ID | 4172817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 1622442 |
End bp | 1623281 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638054359 |
Product | aminoglycoside phosphotransferase |
Protein accession | YP_660927 |
Protein GI | 109897672 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0510] Predicted choline kinase involved in LPS biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.743543 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCATC GGCATCAGCT TAACTCAGCT GTATTGGCTG AGCTAACAAG TCTAGCGCTC TGCCGAGATG GATTTAGCGT AAAGCCAGTT CAAAAGGCCG GGGCGGTTAA TACAAGTTAT TGTTTAACCA CTCCTTCTGG TCGATTTTTT ATGAAAATGT TCGAATCTGA TCAGGTAAAT CAACTTGATC GTCAACAGCT ATTCGATATT CAAAAAGCGG TCTGGCAGAA AGGGATGGCC TGTGAGCCGG TCTACCTGTC AACGGCCGCT GGTTTTCAAT TAGATGCTTG GGTACAAAGT CATACTTTGG AAAACAGCAC TCTGAGCGAA GACATTAAAG CGTGTCAGTT GGCTGATGCA TTGCATCGCA TTCATAGCTT AGATATTGAA GGGCATAGAC TGAATTTACC TGCACAGTGG GCAGGCTATC TATCACAATT GCCGCAGCAA CAATATTGGA AAGAGCACGA GGAAGCGCAG GGGTTAGCGA GCATTTGGTC TGCTACACCG CCCCATGATT TAGTTTTTTG CCATAATGAT TTGTCGTTTC AGCATGTCAC AACAGAACAA TCTAACCTGA TATTCGATTG GGAATATTGC GCGTTATCAA ATCGTTACTT TGACTTAGCG GCTTGCATCG AAGTCAATAA TCTCAATTTT GAGGTTCAAA CTTATTTGCT ATCAAGATAT GCACAAAATA CGCAGTTACC ACTGCCGTTA GTATTACAAA AGACCACTGA AATGCTTCCG TTAGTTAATC TAACTAGTCG CCTTTGGTAC GCTGTAGCAA AGAAAATAAC CGCTTCACAA TGTCATACTG CCGATAAAAT AAGCGGTTGA
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Protein sequence | MPHRHQLNSA VLAELTSLAL CRDGFSVKPV QKAGAVNTSY CLTTPSGRFF MKMFESDQVN QLDRQQLFDI QKAVWQKGMA CEPVYLSTAA GFQLDAWVQS HTLENSTLSE DIKACQLADA LHRIHSLDIE GHRLNLPAQW AGYLSQLPQQ QYWKEHEEAQ GLASIWSATP PHDLVFCHND LSFQHVTTEQ SNLIFDWEYC ALSNRYFDLA ACIEVNNLNF EVQTYLLSRY AQNTQLPLPL VLQKTTEMLP LVNLTSRLWY AVAKKITASQ CHTADKISG
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