| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1342 |
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| Symbol | |
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| ID | 4172811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1617903 |
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| End bp | 1618310 |
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| Gene Length | 408 bp |
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| Protein Length | 135 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638054354 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_660922 |
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| Protein GI | 109897667 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1607] Acyl-CoA hydrolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.181089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGCTTTT TATCAAGACG ATTAGTGATG CCCAATGATC TTAATTATGC CAACTCATTG
TTCGGGGGCA GGGCACTGGA GTGGATAGAT GAAGAGTCTG CGATATACGC AATTTGTCAG
CTAGAAACGA ATCAATTAGT CACTAAACAC ATTGGTGAAA TCAGCTTTGA ATCACCAGCG
TTACAAGGTG ACGTAGTGGA GTTTGGGCTA GAAACCAAGA AGGTGGGCCG TACTTCAATT
ACGGTTACTT GCTTGGTGAG AAATAAAGAA ACAAAGAAAA CGATCTGCTT AGCAGACGAC
ATTGTATTTG TTCGTGTTGA TCGTGAAACG CGCTTACCCG TCGCCCACGG TAAAACGTTT
GATGAGCTGC AAGAACGAGC AAGGTTAGAA ATGAAGGGAC TGACTTAA
|
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| Protein sequence | MRFLSRRLVM PNDLNYANSL FGGRALEWID EESAIYAICQ LETNQLVTKH IGEISFESPA
LQGDVVEFGL ETKKVGRTSI TVTCLVRNKE TKKTICLADD IVFVRVDRET RLPVAHGKTF
DELQERARLE MKGLT
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