Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1324 |
Symbol | |
ID | 4172788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 1590544 |
End bp | 1591101 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638054331 |
Product | putative lipoprotein |
Protein accession | YP_660904 |
Protein GI | 109897649 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGATAT TAAAAACATT GGCATTAACC GCCGGAGCCG CCCTGCTTGC AGGCTGCAGT GCCTCTATCG ATGATTATCG TGACACTAGG CCTACATTTT CACTCAAAAA CTATTTTGAT GGTGAAATAA CAGCTTGGGG AATTGTGCAA GACTATTCAG GAAAGCTAAC TCGCCGATTC TGCGTTGACA TCGTCGCCAC GTGGCAAGGT AACAAAGGGC AACTTCACGA GTCATTTTTC TTTAACGACG GTACCCGCCA GACCCGTATT TGGAAGGTAA ATGTCGCGCA AGACCAAACA GTGACGGGCA CTGCCGGTGA CGTTGTGGGT CAAGCTTCTG GCTCATCCCA AGGTAGCGCG TTTAATTGGC AGTACACTTT AACCGTGCCC ATTGATGGCA CCGAGTATGA TTTTGCCATT GATGATTGGA TGTACGCTCT CGACGACCAG CGCATGATGA ATCGTTCGTA TATGAAAAAG TTTGGCGTGA CGGTGGCAGA GTTCTCTATC TTCTTTGACA AGAGCGCACG TATTCCCTCT TGTGAATCAC AAATGTAG
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Protein sequence | MTILKTLALT AGAALLAGCS ASIDDYRDTR PTFSLKNYFD GEITAWGIVQ DYSGKLTRRF CVDIVATWQG NKGQLHESFF FNDGTRQTRI WKVNVAQDQT VTGTAGDVVG QASGSSQGSA FNWQYTLTVP IDGTEYDFAI DDWMYALDDQ RMMNRSYMKK FGVTVAEFSI FFDKSARIPS CESQM
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