| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1320 |
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| Symbol | |
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| ID | 4173368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1587266 |
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| End bp | 1588156 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638054327 |
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| Product | polyprenyl synthetase |
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| Protein accession | YP_660900 |
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| Protein GI | 109897645 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATTTG AGACTCAACA GAAGCGTGTG CATCAACACG TTGACGCCTT ACTACAAGCG
CAGATTGGCA AACTTGGTGA CCATGCCCCA ACGTTAAAAA ATGCCATGCA GTACGCCTTG
CTAATGGGCG GAAAACGCAT GCGACCTTTT TTAGTGTATG CTGTCGGCGA AGCTTTAGGG
ATTGAACAGT CTGATCTTGA TGCCCCCGCC CTCGCATTAG AATGTATCCA TGCTTATTCC
TTGGTACACG ATGACTTGCC TGCGATGGAC GACGACGATT TACGCCGCGG GCACCCCACG
TGTCACATTC AGTTTGATGA AGCCAACGCT ATTTTAGCCG GCGATGCCCT GCAAACTTTG
GCCTTTGAGA TCATCGTTAA TTACCCATTA TCAGATTTTG CCAATGCGCA ACGTATCGAA
TTGGTGCGTA TTTTAGGTCA AGCATCTGGT TACGACGGCA TGTGTGGCGG ACAAGGAATT
GATTTAGCGT CCACCAATAA GCTGATCACT CAAACACAAC TGGAGTTGCT GCATAGCAAA
AAAACCGGGG CGCTTATCAC TGCAGCGGTA AAAATGGCAT CCGTGTTGTG CCCGTCAGTT
AGCGATGAAA GCAAATCGCT ATTGCAGCAA TATGCGTCCA CCATTGGTTT GGCGTTTCAG
GTGCAGGACG ATATTTTGGA TGTGGTCGGT GATTCACAAA CCTTAGGTAA ACCCCAAGGT
TCAGACCAAG AGCAGAATAA AAGTACCTAT CCTGCACTGC TTGGTTTAGA AGGTGCTCAG
GGCTATCTCG CTCAACTTCA TCAAGAAGCG CTTCAAGCTT TGGACGCTTT ACCTTACAAT
ACACAGGTGT TGAAATCATT TACCGATTTC GTCATTCATC GTAATCATTG A
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| Protein sequence | MTFETQQKRV HQHVDALLQA QIGKLGDHAP TLKNAMQYAL LMGGKRMRPF LVYAVGEALG
IEQSDLDAPA LALECIHAYS LVHDDLPAMD DDDLRRGHPT CHIQFDEANA ILAGDALQTL
AFEIIVNYPL SDFANAQRIE LVRILGQASG YDGMCGGQGI DLASTNKLIT QTQLELLHSK
KTGALITAAV KMASVLCPSV SDESKSLLQQ YASTIGLAFQ VQDDILDVVG DSQTLGKPQG
SDQEQNKSTY PALLGLEGAQ GYLAQLHQEA LQALDALPYN TQVLKSFTDF VIHRNH
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