| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1316 |
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| Symbol | |
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| ID | 4173364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1583226 |
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| End bp | 1584236 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638054323 |
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| Product | thiamine-monophosphate kinase |
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| Protein accession | YP_660896 |
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| Protein GI | 109897641 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0611] Thiamine monophosphate kinase |
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| TIGRFAM ID | [TIGR01379] thiamine-monophosphate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAGAAT TTTCTTTGAT CGATACCTAT TTTCGCGATG TAAGCTTTCA GCGCAAGGAT
GTACTGTTAG GCATAGGCGA TGATTGCGCT ATTACCCAAA TTCCTGCCGG TCAAGCCCTT
GCCACCACGA CTGATACCTT AGTGAGTGGT GTGCATTTTT TGCCTGACGC CGACCCTAAA
GCCATCGCCC AAAAAGCTAT TGCGGTAAAT TTGAGTGATT TGGCAGCCAT GGGCGCTGAG
CCAGCTTGGT TGAGTCTATC TTTATCTTTA CCTAACGTGG ATGAGCAGTG GCTTAAAGCG
TTCTCTGAAG GCTTTAGAGA ACTTACTGAG TATTACTCTG TTCAGCTTAT TGGCGGCGAT
ACGGTGCAAG GTCCACTGGC GATCACCATT ACCGCGCAAG GGTTTGTTGC CGCTGATCAA
GCTTTGAAGC GCTCTGGTGC TAAACCGGGG GATTTCGTTT ATGTGACGGG CTCATTAGGG
GATGCTGGCT TAGGGCTCGA TATTCTGCTT AATCGTGCTG AGGTTAAAAG TACCGAGCAC
AGTGAGTACT TGCTGAAACG TTTACATTAC CCAACACCAA GAGTATTTGC AGGCACCAGT
TTACGCCGTG TGGCGAGTGC CTGTATCGAC ATCTCTGATG GTTTATTAGC GGACATTAAG
CATATATTAA AGGCATCCCA ATGTGGGGCG TGCTTGCAAC TCGATAAACT GCCGTTGTCC
AAAGCGATGC TCGAGTCCGC AGATCGAGAT GCCGCATTTC ATTACGCTTT GAGTTCTGGT
GATGATTACG AGCTTCTGTT TACTGTGAGT GAAGAGCAAA AAAACAATGT AGAGCGTGTA
TTGGCTTGCA GCAATGTGCC AGCAACCTGC ATCGGCCAAA TTAACGGTGC GGTTGGCAAA
ATTGATTTGA AACTCAATGA TGAAAGCTAT GCATACAGCC AAACGGGGTT TGAGCATTTC
AATTCAGCTG AATTAACGAA AGAACAACCT AACCACGCGA AGCGAGCATA A
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| Protein sequence | MKEFSLIDTY FRDVSFQRKD VLLGIGDDCA ITQIPAGQAL ATTTDTLVSG VHFLPDADPK
AIAQKAIAVN LSDLAAMGAE PAWLSLSLSL PNVDEQWLKA FSEGFRELTE YYSVQLIGGD
TVQGPLAITI TAQGFVAADQ ALKRSGAKPG DFVYVTGSLG DAGLGLDILL NRAEVKSTEH
SEYLLKRLHY PTPRVFAGTS LRRVASACID ISDGLLADIK HILKASQCGA CLQLDKLPLS
KAMLESADRD AAFHYALSSG DDYELLFTVS EEQKNNVERV LACSNVPATC IGQINGAVGK
IDLKLNDESY AYSQTGFEHF NSAELTKEQP NHAKRA
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