Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1314 |
Symbol | ribH |
ID | 4173362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 1582254 |
End bp | 1582730 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638054321 |
Product | 6,7-dimethyl-8-ribityllumazine synthase |
Protein accession | YP_660894 |
Protein GI | 109897639 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0054] Riboflavin synthase beta-chain |
TIGRFAM ID | [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATCA TTGAAGGTAA TATTCGCGCA ACAGGCAAAA AATTTGCGTT GGTTGTGTCA CGTTTCAACA GTTTCGTTGT TGAGAGTTTG GTTGAAGGCG CATTAGATAC ACTTGAGCGT CACGGTGAAG TAAACAGCCA AGATATCACT TTGGTTCGCG TGCCTGGTGC ATACGAGTTG CCTATCGCGG CTAAAAAGCT AGCGGAAAAA GGAACCTTTG ATGGGATCAT CGCTCTAGGC GCTGTTATCC GTGGCGGTAC ACCACACTTC GAATTTGTTG CTGGTGAATG CAACAAAGGT TTAGCTCAGG TGTCACTTGA ATTCGGTATT CCGGTTTCTT TTGGCGTTAT CACCACTGAC AGTATCGAGC AGGCTATTGA GCGCTCTGGT ACTAAAGCAG GTAACAAAGG CGCTGAAGCA GCATTAGGTG CACTTGAAAT GGTTAACGTT ATGGCCAATA TCGAAGGGGC AGAGTAG
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Protein sequence | MNIIEGNIRA TGKKFALVVS RFNSFVVESL VEGALDTLER HGEVNSQDIT LVRVPGAYEL PIAAKKLAEK GTFDGIIALG AVIRGGTPHF EFVAGECNKG LAQVSLEFGI PVSFGVITTD SIEQAIERSG TKAGNKGAEA ALGALEMVNV MANIEGAE
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