Gene Patl_1305 details

Gene Information

• Locus tag: Patl_1305
• ID: 4173353
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: -
• Start bp: 1573666
• End bp: 1574430
• Gene Length: 765 bp
• Protein Length: 254 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 638054312
• Product: hypothetical protein
• Protein accession: YP_660885
• Protein GI: 109897630

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGAAGT GGATAGTATT AAGTTGTTTT ATTGGTTTAG AGGTGCATGC CGCTTCTTTG 
GGCACCTACC GTATCTATTT AGACAGTGAG CATCGGCAAG AGAAATTCAT TGTTAAAAAC 
AGCAACGCTA TTCCAGAAAA ATGTGATGTT TCCTTTTCTT ACATGGCATA CGATGATAAA 
GCGGGCGTCA AAAAATTAAC GGCTAATGAG CAAGCGGTTC TATCTCAACC TGCGATATCA 
CATTTGCGCT TTTCCCCTAA GAAATTCACC ATAGAACCAA AATCTTTTCA ATACATCGCC 
TTTACCTATC GCCGTCAAAT AAATGACGAA CCGGCTGAGC ATCGCACATA CGCTAATATC 
CAGTGTGTTC AGTTAGACGA GCGAGCTAAA AAAGGTGTCA ACCTCAAACC CACGATTATG 
CACTCGGTCC CCCTAGTCAT CCGCACCGGA AAGCCTCAAG ATTTAAACGC GAACCTAAAT 
TTCAGCCACG TAGAGCAACA ACAAGACACT ATTTATTTTC GACTTAGCCA TACAGGTAAT 
CGCTCAGTTT ACGGTGATAT AAAGCTAGTG AGTGAAGAGG GGAAAGAGCT CAAAGTACTC 
CAGCGAAATG TAGTGATTTA CCCTGAGATG AAATACAAGG ATTTCAGTTT CTCGCTAGCA 
AGTGCGGGCG AAACATTAAG CAAAAAATTG AAAATCGTCT TTCAAGAGAC CGGTGTATAC 
AGCGCTAAAA AACAATTTGA ATTACCGATA GAAGAGGTAT TGTAA 

 

Protein sequence

MKKWIVLSCF IGLEVHAASL GTYRIYLDSE HRQEKFIVKN SNAIPEKCDV SFSYMAYDDK 
AGVKKLTANE QAVLSQPAIS HLRFSPKKFT IEPKSFQYIA FTYRRQINDE PAEHRTYANI 
QCVQLDERAK KGVNLKPTIM HSVPLVIRTG KPQDLNANLN FSHVEQQQDT IYFRLSHTGN 
RSVYGDIKLV SEEGKELKVL QRNVVIYPEM KYKDFSFSLA SAGETLSKKL KIVFQETGVY 
SAKKQFELPI EEVL