| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1298 |
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| Symbol | |
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| ID | 4173346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1564018 |
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| End bp | 1565067 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638054305 |
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| Product | oxidoreductase-like |
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| Protein accession | YP_660878 |
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| Protein GI | 109897623 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.132661 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT TTAATTGGGC CATTATGGGC CCAGGCTCGA TTGCAGATAG GTTTGCAGAA
GCGTTGATGC CGTCACAAAA AGGCATTCTT TACGCTGTGG CCAGTCGCGA TATTAATAAA
GCACAGGCCT TTGCTGACAA ATACAGCGCT GACGGCGTTC CTAATAAAGC TGACGGCACT
TTTCATCAAG CTGACGGCAC CCCTCCGAAA CCCTACGGCA GCTATCAACA GATGCTGGCT
GATCCTGAGG TCGACGTGGT GTATATCGCT ACGCCGCAAA GCCTTCACTA TGAGCAAGCG
AAAATGTGCT TAGAAGCTGG CAAACATGTA TTGATGGAAA AGCCACTGAC TATTAACGCG
GCGCAAACCG AGGCGCTAAT AGCACTAGCA CAAGAAAAGC AGTTATTACT GCAAGAAGGG
CTGTGGAGCC GCTTTATGCC ATGCTTCGAG CAAGTAAAAT TATGGCTTGA TGAGGGGCGA
ATTGGCGAGC TGCAATATAT TTGCTCTGAC ATTGGTTTTT CTTTTGGTGA CAGAGAAGGG
CACAGATTAC ATAACCCTGC CTTGGGTGGT GGCGCATTAC TCGATTTAGG CGTTTACAGC
ATTACTTTGA GCCAATGTTT GATGCAAGAG CACCCCAGTG AAATTAACGC CATGAGCCAT
TTTGGTAACC TGCAAGTAGA TGAAAACACG ATCGTGAATA TGCGCTATCC GTCTGGGCGC
TGCGCTCAGT TTACTTGCAC GATCGCTGCA CAGGCGAGTA ATTCAATGAC GTTAATGGGC
AGTAAAGGCC GTATTGTATT GCCGTATATG TTTTGGAACG GCAATAAAGC GACTTTGCAG
CAAGAAGACG TGCAAGACGA GGTGATTGAG TTTGCCCATC GGGTAAATGG TTTTGAGTAT
CAAATTGAAG AAGCCATGAA CATGATTGAG AAAAATCAAG TATGCAGTGA TTTTATGCCC
CACGGCGATA GCCTAGCGGT TATGCAAACC ATGGATGAAA TTCGCCGCCA AATTGGCCTG
AAATTCAGCC CTGACGCAGA GCGTATGTAG
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| Protein sequence | MKKFNWAIMG PGSIADRFAE ALMPSQKGIL YAVASRDINK AQAFADKYSA DGVPNKADGT
FHQADGTPPK PYGSYQQMLA DPEVDVVYIA TPQSLHYEQA KMCLEAGKHV LMEKPLTINA
AQTEALIALA QEKQLLLQEG LWSRFMPCFE QVKLWLDEGR IGELQYICSD IGFSFGDREG
HRLHNPALGG GALLDLGVYS ITLSQCLMQE HPSEINAMSH FGNLQVDENT IVNMRYPSGR
CAQFTCTIAA QASNSMTLMG SKGRIVLPYM FWNGNKATLQ QEDVQDEVIE FAHRVNGFEY
QIEEAMNMIE KNQVCSDFMP HGDSLAVMQT MDEIRRQIGL KFSPDAERM
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