| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1296 |
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| Symbol | |
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| ID | 4173344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1560749 |
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| End bp | 1562416 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638054303 |
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| Product | putative ABC transporter ATP-binding protein |
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| Protein accession | YP_660876 |
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| Protein GI | 109897621 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.341182 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCAAT ACGTATATAG CATGAATCGT GTGGGCAAAA TCGTGCCCCC GAACAAGTTT
ATTCTTAAAG ATATTTCACT GAGTTTCTTC CACGGCGCCA AAATCGGCGT TCTCGGTTTG
AACGGCTCAG GTAAATCTAC CCTGCTTCGG ATCATGGCCG GAATCGATAA AGACATCGAA
GGGGAAGCCA TTCCTCAAGC GGGCTTAAAA ATTGGTTACT TACCACAAGA GCCACAGCTA
GACGAAAGCA AAGACGTGCG CGGCAATATC GAAGAAGCCG TCGCCGATGT AGCTCATGCC
CTCAAGCGCA TTGAAGAAGT GTACGCTGCC TACGCAGAAG AAGACGCCGA CTTTGACGCA
CTGGCTAAAG AGCAAGGTGA GCTTGAAGCC ATTATTCAAA GTAAAGACGG TCACAATCTT
GAAAATGCTC TTGAGCGCGC CGCCGATGCC TTGCGTTTGC CGCCTTGGGA TGCAGATGTG
AGTAAATTAT CTGGTGGTGA GCGCCGCCGC GTTGCTCTAT GTCGCTTATT ACTTGAAAAG
CCCGACATGC TGTTACTGGA TGAGCCTACC AACCACTTGG ATGCAGAATC AGTAGCCTGG
TTAGAGCGCT TCTTACACGA CTATGAAGGC ACAGTGGTCG CTATTACCCA CGACCGTTAT
TTCTTAGATA ACGTCGCCGG TTGGATTTTA GAGCTTGACC GTGGCCAAGG TATTCCTTGG
GAAGGCAATT ATTCTTCTTG GTTGGAGCAA AAGGACGCGC GTTTACAACA AGAAGAAAAA
ACCGAAAGTG CGCGTCAAAA ATCGATTAAA ACTGAATTGG AATGGGTACG TTCAAACGCC
AAAGGTCGTC AGTCTAAAAG CAAGGCGCGT ATGGCCCGCT TTGAAGAGCT CAACACCGGC
GATTACCAAA AACGTAACGA AACCAATGAA TTGTTTATCC CACCGGGCGA TCGCTTAGGC
GAGCAAGTCA TTGAAGTAAA CAATTTACGT AAAAGCTACG GTGATCGTTT GCTTATTGAT
GATTTAACCT TCGCCATGCC CAAAGGTGCC ATTGTCGGTA TTGTCGGGCC AAACGGCGCG
GGTAAATCGA CCCTATTTCG CATGCTAAGC GGCGAAGAAA ATGCCGATTC AGGGGAAGTC
ATTGTCGGTA AAACAGTAAA ACTGGCCAGT GTTGATCAGT TTCGCGATCA CATGGATGGC
AATAACACGG TTTACAAAGA AATTTCTGAT GATTCTGACA TTATTCGTAT CGGCAACTTC
GAGCTAAACA GCCGCGCCTA TTGCAGCCGT TTTAACTTTA AAGGCAACGA CCAACAGAAG
TTTGTCAAAG ACTTATCAGG TGGTGAGCGT AATCGTGTGC ACTTGGCCAA GTTATTAAAA
GCCGGCGGCA ACGTGTTGTT ACTGGATGAG CCAACCAATG ACTTGGACGT TGAAACGTTA
CGCGCCCTTG AAAACGCGCT GCTTGAGTTC CCTGGTTGTG CCATGGTTAT CTCGCACGAT
CGCTGGTTCT TGGATCGCAT CGCCACCCAC ATCATGGATT ACCGTGACGA AGGCAAAATC
AACTTCTTCG CGGGTAACTA CACTGAGTAC GCCACTTGGC TCAAAGAAAC CCAAGGTAAA
GATGTGGTTG AGCCTCATCG CTTGAAATAC AAAAAAATCA GTAAATAA
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| Protein sequence | MAQYVYSMNR VGKIVPPNKF ILKDISLSFF HGAKIGVLGL NGSGKSTLLR IMAGIDKDIE
GEAIPQAGLK IGYLPQEPQL DESKDVRGNI EEAVADVAHA LKRIEEVYAA YAEEDADFDA
LAKEQGELEA IIQSKDGHNL ENALERAADA LRLPPWDADV SKLSGGERRR VALCRLLLEK
PDMLLLDEPT NHLDAESVAW LERFLHDYEG TVVAITHDRY FLDNVAGWIL ELDRGQGIPW
EGNYSSWLEQ KDARLQQEEK TESARQKSIK TELEWVRSNA KGRQSKSKAR MARFEELNTG
DYQKRNETNE LFIPPGDRLG EQVIEVNNLR KSYGDRLLID DLTFAMPKGA IVGIVGPNGA
GKSTLFRMLS GEENADSGEV IVGKTVKLAS VDQFRDHMDG NNTVYKEISD DSDIIRIGNF
ELNSRAYCSR FNFKGNDQQK FVKDLSGGER NRVHLAKLLK AGGNVLLLDE PTNDLDVETL
RALENALLEF PGCAMVISHD RWFLDRIATH IMDYRDEGKI NFFAGNYTEY ATWLKETQGK
DVVEPHRLKY KKISK
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