| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1293 |
|---|
| Symbol | |
|---|
| ID | 4173341 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | + |
|---|
| Start bp | 1555541 |
|---|
| End bp | 1555858 |
|---|
| Gene Length | 318 bp |
|---|
| Protein Length | 105 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638054300 |
|---|
| Product | cytochrome C oxidase subunit IV |
|---|
| Protein accession | YP_660873 |
|---|
| Protein GI | 109897618 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3125] Heme/copper-type cytochrome/quinol oxidase, subunit 4 |
|---|
| TIGRFAM ID | [TIGR02847] cytochrome o ubiquinol oxidase subunit IV |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCATT CTGCTGAAGC GACTGCCCAT GGCAGCGTAA AGTCCTATCT TATTGGGTTT
GTTTTATCAG TCATTCTCAC GGCTATTCCG TTTTGGATGG TGATGAGTGG ACACTTTGGT
AAATCAGTCC TGTTTTACAG TGTGGTGTCC TTTGCGTTGG TGCAAATTGT GGTGCACTTG
AAGTACTTTT TGCACTTGAA TTTTTCAGTC AAAGGGCGTT TGGACACATT TGCGTTTCTG
TTTACCGCAC TGATTATTGT GATGGTGGTT GGGTTGTCCA TTTGGATTAT CTACAGCGCA
AACGCGATGA TGATGTAA
|
|---|
| Protein sequence | MSHSAEATAH GSVKSYLIGF VLSVILTAIP FWMVMSGHFG KSVLFYSVVS FALVQIVVHL
KYFLHLNFSV KGRLDTFAFL FTALIIVMVV GLSIWIIYSA NAMMM
|
|---|
| |