Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1287 |
Symbol | |
ID | 4173335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 1549032 |
End bp | 1550315 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638054294 |
Product | transporter |
Protein accession | YP_660867 |
Protein GI | 109897612 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1914] Mn2+ and Fe2+ transporters of the NRAMP family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTAG CGAAAACAAT GGCCATATTA GGCCCAGGTA TCGTTTGGGC CGCCACCAGT ATTGGTGTAT CACATATAGT GCAGTCAACC CGAGCAGGAG CAGATTTCGG TTTTGCCTTA TTGGGCTTTA TTTTACTGGC TCACGTGGTG AAGTACCCCT TTTTTCTATT TGGCCCTAAG TACGCTGGGT TAACAGGCAA GAGCTTACTC GATGGCTATC GCTCAGTAGG CAAATGGGCA TTTTACCTGT TTCTCTGTTT GACCTTTATC ACCATGTTTT TTGTTCAATC AGGGGTTACC ATAGTCACAG CCGCATTAGC CATGAATCTA TTTGGTGAGG TGCTTACCCT TTCCCAATGG GCAGCCTTGA TATTGGGTGT GGTATGCGCG GTGCTCTTGA TAGGCCATTA CAAGCTTCTC AACACGCTAT TAAAATGGAT GATGCTGGTA TTGGTCATTT GCAGCATTAT CGCTTGGTTT GCAGCAATCG GGCGTTTGGG ATTCAGCCCA GCCGAAGGGG TGCCGACTAT CGAAGTTGGC TCTATGGCAA GTATCGCCTT TATCGTGGCA TTGATAGGCT GGATGCCCAC CGCCGTTGAA GTATCGGTTT GGCATTCGTT ATGGATATTA TCTCGCGGGG CCAAACCTGG TGTTCAAAAC GCGAAAAATG CGACCTTAGA CTTCAACATC GGTTATGCGG CGAGTTTATT GTTAGCCATC ATCTTTTTAT GGTTGGGCGC TTTGCTCATG TTTGGCCAAG GCGAAGGTTT TGCCAACTCA GCAGCAGCAT TTGCTGGGCA ACTTGTCGGG ATTTACAGCA ATGCCTTGGG GGACTGGAGC TGGTTGCTCA TGGCCATTGT TACCTTTGTG GCGCTATTTT CATCTACCTT TGCGGTTGCC GATGGTTTTC CACAAGTATG GAAGCGTGCA TATCAGCTCA ACCACTCACA TGATGCCCCC TTACCCCTTG ATAGCGCCAG TGATACGCCG CACGCTCGAA AAGGAAATGT GGTTTATATC GCCGCACTTT GCGTACTCGC CTTAGGCAGT TGGTGGATAA TTTCTGACTT TAGCGCTGAC ATTAAAGCCC TCTTGGATTT TGTGACGACA GTGTCTTTTG TCAGTGCGCC TATCTATGCT TGGCTAAATT ATAAGGTCAT GATGGGGGCA GATGTTGACG CCCAATATAA GCCCCAAGGT ATATTTCGTA TCTACACTTT ATGCTGCTTA AGCGTGCTAA CACTCTTCAG TATGTATTAT CTTTTTTGGA AGTTTGTAGC TTAA
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Protein sequence | MKLAKTMAIL GPGIVWAATS IGVSHIVQST RAGADFGFAL LGFILLAHVV KYPFFLFGPK YAGLTGKSLL DGYRSVGKWA FYLFLCLTFI TMFFVQSGVT IVTAALAMNL FGEVLTLSQW AALILGVVCA VLLIGHYKLL NTLLKWMMLV LVICSIIAWF AAIGRLGFSP AEGVPTIEVG SMASIAFIVA LIGWMPTAVE VSVWHSLWIL SRGAKPGVQN AKNATLDFNI GYAASLLLAI IFLWLGALLM FGQGEGFANS AAAFAGQLVG IYSNALGDWS WLLMAIVTFV ALFSSTFAVA DGFPQVWKRA YQLNHSHDAP LPLDSASDTP HARKGNVVYI AALCVLALGS WWIISDFSAD IKALLDFVTT VSFVSAPIYA WLNYKVMMGA DVDAQYKPQG IFRIYTLCCL SVLTLFSMYY LFWKFVA
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