Gene Patl_1285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1285 
Symbol 
ID4173333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1547176 
End bp1547937 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content46% 
IMG OID638054292 
Producthypothetical protein 
Protein accessionYP_660865 
Protein GI109897610 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGCAG GCTTACGAGA CATTCAACGA TTCACTATTG CAGCCACAGA CGGTGACATT 
GGCATCATCA AAGATTTCTT GTTTGACGAC CGTGCATGGA CAATTCGTTA TATGTACGTC
GATACCCATA AATGGTTACC CCTAGGGGAA AAGGTGCTGA TCTCCCCTAT TTCGTTACGA
GAAATAGACA CAGATGACGA AAAAATTCAC GTTGCTTTGA GTAAACAGCA AGTGAAAGAC
AGCCCATCGA TTGATGAAGA AAAAACTGTC TCCAGAGAGT ACGAAGAAAT ACTGTTTTCT
TATCTGGGTT ACGGCTATTA CTGGACGGGC CCTGGTGCGT GGGGCGAATA TGCTCATCCA
ACAGCCTTGG TAAACCAACA AGCACTGGAG CAAGCAAACA GCAATTTAGA GGAGCATGAC
AAGAGCAAAG CTAACCACTT ACGCTCAATC GATGAATTGC AAGGGTATGA CGTCATCTCA
GGTGGTGAAA CGGTAGGCCA CATCCATGAC CTGATTTTAG ACACGGACAA TTGGGAAGTG
CCTATGTTGA TTATAGATAC CCACAATTGG CTACCCGGTG GAGAGAAGCT ATTACTGGCG
CCAAAGCACA TTGATGATAT CAATTGGCTT GAGCAACGCG TGCACTGCAC CCTATCAGCT
GCGGATATTG AGCGTTGCCC CAAGTGCGAT CATAACTTGC TAAATGACGC CGATTACAAA
CTCAAAGTGA GACGCGCCCT GCAGGGCTTG CCCAGCGCAT AA
 
Protein sequence
MLAGLRDIQR FTIAATDGDI GIIKDFLFDD RAWTIRYMYV DTHKWLPLGE KVLISPISLR 
EIDTDDEKIH VALSKQQVKD SPSIDEEKTV SREYEEILFS YLGYGYYWTG PGAWGEYAHP
TALVNQQALE QANSNLEEHD KSKANHLRSI DELQGYDVIS GGETVGHIHD LILDTDNWEV
PMLIIDTHNW LPGGEKLLLA PKHIDDINWL EQRVHCTLSA ADIERCPKCD HNLLNDADYK
LKVRRALQGL PSA