Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1285 |
Symbol | |
ID | 4173333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 1547176 |
End bp | 1547937 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638054292 |
Product | hypothetical protein |
Protein accession | YP_660865 |
Protein GI | 109897610 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGCAG GCTTACGAGA CATTCAACGA TTCACTATTG CAGCCACAGA CGGTGACATT GGCATCATCA AAGATTTCTT GTTTGACGAC CGTGCATGGA CAATTCGTTA TATGTACGTC GATACCCATA AATGGTTACC CCTAGGGGAA AAGGTGCTGA TCTCCCCTAT TTCGTTACGA GAAATAGACA CAGATGACGA AAAAATTCAC GTTGCTTTGA GTAAACAGCA AGTGAAAGAC AGCCCATCGA TTGATGAAGA AAAAACTGTC TCCAGAGAGT ACGAAGAAAT ACTGTTTTCT TATCTGGGTT ACGGCTATTA CTGGACGGGC CCTGGTGCGT GGGGCGAATA TGCTCATCCA ACAGCCTTGG TAAACCAACA AGCACTGGAG CAAGCAAACA GCAATTTAGA GGAGCATGAC AAGAGCAAAG CTAACCACTT ACGCTCAATC GATGAATTGC AAGGGTATGA CGTCATCTCA GGTGGTGAAA CGGTAGGCCA CATCCATGAC CTGATTTTAG ACACGGACAA TTGGGAAGTG CCTATGTTGA TTATAGATAC CCACAATTGG CTACCCGGTG GAGAGAAGCT ATTACTGGCG CCAAAGCACA TTGATGATAT CAATTGGCTT GAGCAACGCG TGCACTGCAC CCTATCAGCT GCGGATATTG AGCGTTGCCC CAAGTGCGAT CATAACTTGC TAAATGACGC CGATTACAAA CTCAAAGTGA GACGCGCCCT GCAGGGCTTG CCCAGCGCAT AA
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Protein sequence | MLAGLRDIQR FTIAATDGDI GIIKDFLFDD RAWTIRYMYV DTHKWLPLGE KVLISPISLR EIDTDDEKIH VALSKQQVKD SPSIDEEKTV SREYEEILFS YLGYGYYWTG PGAWGEYAHP TALVNQQALE QANSNLEEHD KSKANHLRSI DELQGYDVIS GGETVGHIHD LILDTDNWEV PMLIIDTHNW LPGGEKLLLA PKHIDDINWL EQRVHCTLSA ADIERCPKCD HNLLNDADYK LKVRRALQGL PSA
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