| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1284 |
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| Symbol | |
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| ID | 4173332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1544338 |
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| End bp | 1547061 |
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| Gene Length | 2724 bp |
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| Protein Length | 907 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638054291 |
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| Product | aconitate hydratase 1 |
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| Protein accession | YP_660864 |
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| Protein GI | 109897609 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1048] Aconitase A |
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| TIGRFAM ID | [TIGR01341] aconitate hydratase 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACAAG CTTCCCCTTA TCTAAAAACA TTGACCCTCG AGGGTGAACA ATTCTCTTAT
TATGCCCTTG ATGCCCTCTC AGATACCCAC AATATCGAGC GACTGCCTTT CGCCGCTAAA
ATATTGTTAG AAAACCTCTT GCGCCACAGT GCTGAAAACT TTGTTCAAGA AGAAGATATC
AACAAACTCG CCACCTGGGA TATTAATGAC CAGTCAACGA CTGAGATTGC TTTCGTTCCT
TCTCGAGTGG TGCTACAAGA TTTTACCGGC GTACCGGCGG TAGTTGACTT AGCCGCCATG
CGCGATGCCA TGGTTGATTT AGGAGGCGAC CCGCAAAAAA TTAATCCGTT AAAACCCGTG
GAATTGGTTA TTGACCACTC CGTCATGGTG GATTATTTCG CCCAAGACGA TGCCTTCGAC
AAGAATACCG CGATGGAAGT GCAGCGTAAT AAGGAACGCT ATCAGTTCTT ACGCTGGGGT
CAGCAGGCGT TTGACAATTT TAAAGTGGTT CCGCCAGGTA AAGGCATTGT GCATCAGGTG
AACTTAGAAT ATCTGGCACG TGTCACCTTT ATTGAAGAGC AACACGAGCA GCCGTTACTT
TATCCAGATA CCCTAGTAGG CACAGATTCC CACACGACCA TGATCAACGG CTTAGGCATT
TTGGGCTGGG GTGTAGGCGG CATTGAGGCT GAAGCCGCCA TGTTAGGTCA GCCAGTCACC
ATGCTGATAC CTGAGGTAGT TGGCATGGAA ATTACCGGCA GTTTGCCGCC CGGTACCACG
GCGACAGATT TAGTATTGAC CATTACTCAA AAGCTACGCG AATTTGGCGT CGTCGGTAAA
TTTGTCGAAT TTTACGGCGA AGGGGTAAAA CACCTCACTA TAGCCGACAG AGCTACCATA
GCGAACATGG CACCAGAGTA CGGTGCAACG TGTGGTATCT TCCCGCTAGA CGAACAAACC
GAAACCTACC TGCGTTTGAC TGGCCGCGAA GAGCGCAATA TTAATGTGAT CAAAGCGTAT
GCACAAGCAC AAGGCATGTG GGGCAGCGAA GCTCAGCAAA GCGCAATCTA TCATGCGAAT
CTACACATTG ACCTTAGTGA TGTAGTAACC TCGATTGCGG GACCTAAACG CCCCCAGGAT
AGGATCCCGT TAAGTGAAGC TGCAGACAAG TTCAGTACGT GGTTATCTGA GCAGGAAAAA
TTGATTATCA CCACCGAAGA TCCCGAGAAA GGGCGTTTCG AATCAGAAGG TGGCCATCAA
GCAGAGAAAA GTGAGGACTC CTCAGAGGTC GAATACAATG GTCAGCGTTT CAGCCTTAAC
GACGGCGCAG TCGTGATAGC GGCCATCACC AGTTGTACCA ATACCTCCAA CCCTTCTGTG
CTGATTGCTG CCGGCTTACT GGCCAAAAAA GCCAGTGAAA TGGGTCTGAC CGTAAAACCA
TGGGTGAAAA CCAGCTTTGC GCCTGGCTCT CAAGTCGTCA CCGAATACCT TAATAAGGCT
AACCTAACCC ACGAACTCGA AAATTTAGGC TTTCATCTAG TCGGATACGG CTGTACTACC
TGCATAGGCA ACTCGGGGCC ACTGCCCGAG CCTATCAGCG CTGCTATTCG TAAAGAAAAG
CTAAATGTAA CTTCCGTGCT ATCAGGCAAT CGTAATTTTG AAGGTCGTAT TCACTCAGAC
GTAAAAGCTA ATTACCTTGC CTCTCCTCCG TTAGTTATCG CATATGCGCT AGCCGGAAAT
ATGCAGATTG ACTTGCTCAA AGAGCCCCTT GGCTCCAGTA AAGACGGTAA GCCCGTTTAC
TTGCGTGATA TTTGGCCAAG CAATGAAGAG ATTCAAGCGC TTGTGACTGA TGTGGTCAAT
AGCGACATGT TCTCTGAACG TTATAGCCAT ATTTTTGAGG GTGACGAGAC ATGGAACAAT
TTAGACGTGG TCGATAGCGA GCAATATAAT TGGCCTGAAT CAACTTACGT TAAAAAGCCC
ACCTTTTTCG ATGGCATTCA GCAACACCCC GAAGCGATCA GTGCTATTAA AGATGCTCGC
TGCTTGTTGA AACTCGGCGA CACGGTCACG ACGGATCATA TTTCTCCAGC CGGTAGCATT
GCCCCTGATG GCCCTGCTGC GCAATACCTG CAAGCGCACG GTGTTGAGGA GCACGACTTC
AACTCTTTTG GCTCACGCCG AGGAAATCAC GAAGTTATGA TGCGTGGAAC ATTCGCCAAT
GTCAGATTGA AAAATCAACT CGCCCCCGGT ACAGAAGGCG GCTGGACGCG CTTTCAACCA
TCAGCTGAAC AGATGTCTGT ATTTGATGCA GCAATGAAGT ATCAAGAACA AGGCACGCCA
ACGGTGGTAA TTGCGGGCAA AGAGTACGGC ACAGGGAGTT CTCGCGACTG GGCCGCAAAA
GGTCCACTGT TGCTCGGTGT CAAAGCGGTA ATTGCCGAGA GCTACGAACG AATTCATCGC
TCTAATCTGA TAGGTATGGG TATTCTACCC CTACAATTTA AATCAGGCGA CAGTGCCGCC
AGTTTGAAGT TAGACGGCAC GGAGCAGTAC TCGATTGACG CCATAGATGG AGATCAAAAA
GAAGTAGTGG TATCGGTAAA AGGCGAACAA GGAGAATTCA CCTTTGACGC GCAGATCCGC
ATCGATACCC CCAATGAGTT CAGTTACTTC AATGACGGTG GCATTCTTCA ATATGTACTG
CGAAGCCTGA ATAAAAGTGT TTAG
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| Protein sequence | MQQASPYLKT LTLEGEQFSY YALDALSDTH NIERLPFAAK ILLENLLRHS AENFVQEEDI
NKLATWDIND QSTTEIAFVP SRVVLQDFTG VPAVVDLAAM RDAMVDLGGD PQKINPLKPV
ELVIDHSVMV DYFAQDDAFD KNTAMEVQRN KERYQFLRWG QQAFDNFKVV PPGKGIVHQV
NLEYLARVTF IEEQHEQPLL YPDTLVGTDS HTTMINGLGI LGWGVGGIEA EAAMLGQPVT
MLIPEVVGME ITGSLPPGTT ATDLVLTITQ KLREFGVVGK FVEFYGEGVK HLTIADRATI
ANMAPEYGAT CGIFPLDEQT ETYLRLTGRE ERNINVIKAY AQAQGMWGSE AQQSAIYHAN
LHIDLSDVVT SIAGPKRPQD RIPLSEAADK FSTWLSEQEK LIITTEDPEK GRFESEGGHQ
AEKSEDSSEV EYNGQRFSLN DGAVVIAAIT SCTNTSNPSV LIAAGLLAKK ASEMGLTVKP
WVKTSFAPGS QVVTEYLNKA NLTHELENLG FHLVGYGCTT CIGNSGPLPE PISAAIRKEK
LNVTSVLSGN RNFEGRIHSD VKANYLASPP LVIAYALAGN MQIDLLKEPL GSSKDGKPVY
LRDIWPSNEE IQALVTDVVN SDMFSERYSH IFEGDETWNN LDVVDSEQYN WPESTYVKKP
TFFDGIQQHP EAISAIKDAR CLLKLGDTVT TDHISPAGSI APDGPAAQYL QAHGVEEHDF
NSFGSRRGNH EVMMRGTFAN VRLKNQLAPG TEGGWTRFQP SAEQMSVFDA AMKYQEQGTP
TVVIAGKEYG TGSSRDWAAK GPLLLGVKAV IAESYERIHR SNLIGMGILP LQFKSGDSAA
SLKLDGTEQY SIDAIDGDQK EVVVSVKGEQ GEFTFDAQIR IDTPNEFSYF NDGGILQYVL
RSLNKSV
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