| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1281 |
|---|
| Symbol | |
|---|
| ID | 4173292 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | + |
|---|
| Start bp | 1539319 |
|---|
| End bp | 1540386 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 638054288 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_660861 |
|---|
| Protein GI | 109897606 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAAAT TTTCTTCTTT TTCGTTGTCT TTTTTCATCG CAGCGAGCGG GTTTACCCAG
CTCTCATACG CACAAAGTAC TCCTTCTGAA TTTGCCGAAT TGAGTCTGAA TGAGCTGTTT
GACATGAATA TCGCGGACGA TAGCGAAAAC AGTGAAGCGA GCAGCCCTTG GACATTCGCA
TATAATTTTA AGTTTGCTGA ATTTCGAGGC TATCTTGATG GTGACGCTAA GCGCGCAGAT
TCTGAGGTGT TGTGGCAAGG TGCGGGCACT CAAAGAACGG ACAGTAACTT TCCTATTCTT
CCTACGATAA TCGACCAACA AGTGCATGTT TTTTCGATGG GATATCGCAT TACCCCTGAT
TGGCGAGTGC ACGTTTCTTT GCCGTATATC ACCCAGAGCA CTGACCATAT TAGCGTCGTG
CCTGACTATG ATCATTTTAC AATCGATAGT GATGGCATAG GTGATGCTGT GGTGTCTGTG
AGTCGTCGCC TTATCGCGAC AACGGATGAT GTGTGGTGGT TTACCGCCGG TATCAGCTTG
CCTACAGGCT CAATTGACGA AAAAGGTGAT ACTCCACGAG ATGCAGGGGA CCAGCAGCTA
CCTTATACAA TGCAGCTTGG TTCGGGTACG TATGATTTCC CTCTAGAATT TAGTTACCAA
AGCATGGGCG AGCACGATTT TAGTTTGAGT ATGTCAGCGA TGATACGCAC CGGTAAAAAT
GATAGGGATT ATCGTCTGGG TAATAGTTAC AGTCTTGCAA GTACTTATCG CTTTAACACA
TCAGACGACC TGAAACCCTT TGTTGGATTG TCTTACCAGT ACCGCAGTGC CATTGATGGG
CAAGACGATG AAATTACCCT CAATGGTGCA TTTCCCTATC CTGCAAGTAT TACCAATCCA
AGATTGTATG GTGGCAAAAA AATCAGTGCT GAGATCGGTG TCAGATGGAA ATTCAGCGAG
TCTTATGCGC TGAGTTTGGC ATTTTCAAAG CCTCTCTATC AGAATTTGAA TGGCCCGCAA
CCAAAAGAAA ATTTCCAATC TGGCTTAACC TTATCCCGTT TGATGTAG
|
|---|
| Protein sequence | MIKFSSFSLS FFIAASGFTQ LSYAQSTPSE FAELSLNELF DMNIADDSEN SEASSPWTFA
YNFKFAEFRG YLDGDAKRAD SEVLWQGAGT QRTDSNFPIL PTIIDQQVHV FSMGYRITPD
WRVHVSLPYI TQSTDHISVV PDYDHFTIDS DGIGDAVVSV SRRLIATTDD VWWFTAGISL
PTGSIDEKGD TPRDAGDQQL PYTMQLGSGT YDFPLEFSYQ SMGEHDFSLS MSAMIRTGKN
DRDYRLGNSY SLASTYRFNT SDDLKPFVGL SYQYRSAIDG QDDEITLNGA FPYPASITNP
RLYGGKKISA EIGVRWKFSE SYALSLAFSK PLYQNLNGPQ PKENFQSGLT LSRLM
|
|---|
| |