| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1277 |
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| Symbol | |
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| ID | 4173288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1532939 |
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| End bp | 1533694 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638054284 |
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| Product | hypothetical protein |
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| Protein accession | YP_660857 |
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| Protein GI | 109897602 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1720] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00104] probable methyltransferase, YaeB/AF_0241 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.241962 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATCGAG TTGAATCCCT GCCGGTACAG GATCACATCA ACCTAAGGCC ATTGGGCGTA
ATTCGCACAC CATACCAACA GAAGTTCGCT ATTCCTAGGC AACCGAACCT GATTGATGCC
GCCAGTGGCG AAATTATATT TCACACGGAA TTTAGCGATC CGAACATGTT ACGGGGTATT
GAGCAATTCA GTCATTTGTG GCTGTTGTTT CAATTTCACC AAACAGTGGA AAAAGGTTGG
TCCCCCATGG TGCGCCCTCC TCGTCTCGGC GGAAACAAGA AACAAGGCGT GCTGGCCACA
CGCAGCACTT TTAGGCCAAA TGCTATTGGA ATGTCTGTTG TTCAATACGA TAAAGTCGAA
CATAAAGACG GGCGCTTAAG CCTGCATGTT AAAGGGGTTG ATTTACTTGA TGGCACGCCA
ATCATCGACA TTAAACCTTA CGTACCTTGG GCTGACAGCA TCCCTGAGGC AAAAGGTGGT
TTTGCCGCCG AGCGCCCTAC ACTAATGCCG GTATATTTTG AAAGTCAATC TGCCAAGCAG
TTGGCCCACT GGCAAGCCAA TTATCCTATG CTTAGCGCAC TGATCGAACA AGTACTAGCG
CAGGACCCAC GCCCCGCTTA TAAAGCCGAG CAAGACAGCA ACGAAGAGTA TGGAATGAGC
CTTTATGATC TGAACATACG TTGGCGAGTC AGCGCTAAGG CCAACTATGT GGTGAGTATC
ACGCACAATT ACGAGCCGCA AGCGCATAAA GATTAA
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| Protein sequence | MNRVESLPVQ DHINLRPLGV IRTPYQQKFA IPRQPNLIDA ASGEIIFHTE FSDPNMLRGI
EQFSHLWLLF QFHQTVEKGW SPMVRPPRLG GNKKQGVLAT RSTFRPNAIG MSVVQYDKVE
HKDGRLSLHV KGVDLLDGTP IIDIKPYVPW ADSIPEAKGG FAAERPTLMP VYFESQSAKQ
LAHWQANYPM LSALIEQVLA QDPRPAYKAE QDSNEEYGMS LYDLNIRWRV SAKANYVVSI
THNYEPQAHK D
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