| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1276 |
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| Symbol | |
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| ID | 4173287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1531129 |
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| End bp | 1532844 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638054283 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_660856 |
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| Protein GI | 109897601 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.695644 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCACAA GCCAATATTT ATTATCGACC CAAAAAGAAA CACCTGCTGA TGCAGAAGTC
ATCAGCCACC AGCTTATGCT ACGTGCGGGC TTGGTTCGCA AGCTAGCATC AGGACTTTAT
ACATGGTTAC CCACCGGCTT GCGCGTGTTA AACAAAGTCG CTCAAATCGT TCGCGAAGAA
ATGGATCGTG CCGGTTCGTT AGAAATATTG ATGCCTGTCG TGCAACCTGC CGATTTGTGG
CAAGAGTCTG GTCGCTGGGA CGAATATGGC CCTGAGCTTT TACGCATAAA AGACCGTCAT
TACCGAGACT TCGTATTAGG TCCAACTCAT GAAGAAGTGG TCACCGCCTT AGTCAAAAAT
GAAGTAAGCA GCTATAAGCA ATTGCCATTG AACGTTTACC AAGTTCAAAC GAAGTTTCGC
GATGAAGTTC GCCCGCGTTT TGGAGTCATG CGTGGTCGTG AATTCACCAT GAAAGATGCT
TACTCGTTTC ATTTAAGCGA TGAGTGCTTG AACAAAACCT ACGATGACAT GTTCGCAGCA
TATTGCCGTG TGTTTGAACG TATCAACCTA GAATTTCGCC CAGTGATTGC CGATAACGGC
TCCATTGGTG GTAATGCCTC CCACGAATTC CACGTGTTGG CTGACTCAGG TGAAGATGAT
ATCGCCTTTA GTAACGCATC AGATTATGCC GCTAACATCG AAAAAGCAGA GGCACTAGCC
CCGCAATTTT CACGCCCAGC CCCCAGTGCT GAACTCACTA AAGTGGCCAC GCCAAATGCG
AAAACCATTG AGCAGGTCAG CGCGTTACTT AACATACCTG CTGAACAATC AGTTAAAACC
CTAATAGTAC TGGGTGAAGC AGATAACAAG GGACAGCAAG GACTTATAGC ACTTGTGCTG
CGCGGGGATC ATCAATTAAA TGAGCTCAAA GCAGAGAAAA TAGACGGCGT TTATGCTCCG
CTTACTATGG CCAGTGAAGC GCAAATTGAA GACACTATCG GTTGCTCAAT CGGCTCTATT
GGGCCGGTTG GTTTAAACAT ACCTGTTATC GCTGATCGCA GCGCGGCGGT ATTAGCAGAC
TTTGTGTGCG GCGCGAATGA AAATGACGTG CATTACACAG GCGCTAACTG GGAGCGCGAT
GCAAAAGAGT TCCAAGAAGC GGACATTCGT AATGTACAAG CCGGAGATCC ATCGCCAGAT
GGTCAAGGTA CTCTTGAGAT CAAACGTGGT ATTGAAGTTG GTCACATATT CCAACTCGGC
AGTAAGTACT CAGAAGCATT GAACTGCGGT GTGCTAGATG AAAACGGCAA GCATCAAGTG
CTTAATATGG GTTGTTATGG CATTGGGGTT TCCCGTATCG TGGCCGCGGC AATTGAGCAA
AATCACGATA AGTACGGCAT TATTTGGCCT GATGCAATAG CACCTTTTAA AGTTGCGATC
GTACCGATGA ATATGCACAA ATCCCACCGT ATACAACAAG TTGCAGAAGA TTTATACGCC
CAACTCAAAG CCGCTGGAGT CGAAGTATTG TTCGACGATC GTAAAGAGCG CCCAGGCGTG
ATGTTTAACG ACATGGAATT GGTAGGTGTA CCGCACACGA TTGTTATCGG TGAGCGTAAC
CTTGATGAAC AAAAAGTCGA ATATAAAAAT CGTCGTAGTG GTGAAAAGCA GCTGATTGAT
ATCCCGCAGT TGGCGGAATT TGTTTCCACG CTGTAA
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| Protein sequence | MRTSQYLLST QKETPADAEV ISHQLMLRAG LVRKLASGLY TWLPTGLRVL NKVAQIVREE
MDRAGSLEIL MPVVQPADLW QESGRWDEYG PELLRIKDRH YRDFVLGPTH EEVVTALVKN
EVSSYKQLPL NVYQVQTKFR DEVRPRFGVM RGREFTMKDA YSFHLSDECL NKTYDDMFAA
YCRVFERINL EFRPVIADNG SIGGNASHEF HVLADSGEDD IAFSNASDYA ANIEKAEALA
PQFSRPAPSA ELTKVATPNA KTIEQVSALL NIPAEQSVKT LIVLGEADNK GQQGLIALVL
RGDHQLNELK AEKIDGVYAP LTMASEAQIE DTIGCSIGSI GPVGLNIPVI ADRSAAVLAD
FVCGANENDV HYTGANWERD AKEFQEADIR NVQAGDPSPD GQGTLEIKRG IEVGHIFQLG
SKYSEALNCG VLDENGKHQV LNMGCYGIGV SRIVAAAIEQ NHDKYGIIWP DAIAPFKVAI
VPMNMHKSHR IQQVAEDLYA QLKAAGVEVL FDDRKERPGV MFNDMELVGV PHTIVIGERN
LDEQKVEYKN RRSGEKQLID IPQLAEFVST L
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