| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1275 |
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| Symbol | |
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| ID | 4173286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1530005 |
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| End bp | 1530844 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638054282 |
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| Product | beta-lactamase-like |
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| Protein accession | YP_660855 |
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| Protein GI | 109897600 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGATTAA CTTTTTACGG CGTTAGAGGC TCGATACCTA CCCCAGGAGC TGAGTATATT
AAGTACGGCG GTAATACAGC CTGCGTACAC ATCGAGCTAA ACGACGGCAA TGACATCATC
ATTGATGCGG GCACAGGTAT TCGCACTTTA GGCCAGAAAC TCGCCGCGAA AGAAGGGGAT
ATACACTTAT TATTGACCCA CAATCACTGG GATCACATCC AAGGCTTCCC CTTTTTTACG
CCTATATACC AACCTCAGCG CAATATTTTT ATCACCCCAG GACAAACGAC TCTAGCTGAG
CACGATAATA TTTTACGCCA AATGAGTGGT AGCTACTTTC CCGTTCAGTT TAATACCTTA
CCTTCGGCTA TTGCTCTTGA AGCAAAGCCT GACAATCTGC GCCAATGGCA TATAGGTGAG
GCAAAAATTC AGCGTCAAAA AATTAATCAT CCAGGTGGAG GCAGCGCATA TTGTATTACC
GCCGATGGCA GTAAAGTGGT ATACATTACC GACAATGAAT TGTATCCCCC CTACAAGAAA
AGCACTGACT TTCTCGATTG GGTAGAATTC GCTCGTGATG CAGACTTAGT CATTCATGAT
GCTCAGTACA TGCTGACTGA TATGCCAGGT AAAGCGGGAT GGGGTCACTC AGTGGCCGAA
GAAGCGGTAA AATTGAGTAT GGCATGTCGT GCTAAACGTT TAGCTCTGTA CAGTCACGAT
CATACACGCA CTGACGATAA TATTGCTGCC GTAGAAGCCC ACTGCCAAGA GCTAGTGGAA
ATAGCTCAAG CTGATCTCGA GCTATTCGCT GCAGCAGAAG GTATGAGCAT CGCTTTGTAA
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| Protein sequence | MRLTFYGVRG SIPTPGAEYI KYGGNTACVH IELNDGNDII IDAGTGIRTL GQKLAAKEGD
IHLLLTHNHW DHIQGFPFFT PIYQPQRNIF ITPGQTTLAE HDNILRQMSG SYFPVQFNTL
PSAIALEAKP DNLRQWHIGE AKIQRQKINH PGGGSAYCIT ADGSKVVYIT DNELYPPYKK
STDFLDWVEF ARDADLVIHD AQYMLTDMPG KAGWGHSVAE EAVKLSMACR AKRLALYSHD
HTRTDDNIAA VEAHCQELVE IAQADLELFA AAEGMSIAL
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