| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1274 |
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| Symbol | |
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| ID | 4173285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1528848 |
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| End bp | 1529978 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638054281 |
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| Product | patatin |
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| Protein accession | YP_660854 |
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| Protein GI | 109897599 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.534062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATGAAC GTAATCATTA CGCGTTGCTT TTATCCGGCG GCGGCGCAAG AGCCGCATAT
CAATTGGGCG TGCTGAAGTC TATCAGCACT TATTTACCTA GAAACCAAGG GATCCCCTTT
CCCATTGTGT GCGGAAGTTC AGCTGGGGCT ATTAATGCCA CAGGACTCGC ATGCTATGCA
TCTTGTTATC ATTTAGGTAT TCGCAAGTTA GAACATGTGT GGAAAAATTT CACCACTCGG
CAAGTGTACG GGAGTGGAAT ACGAGATGTG TATTCACATC TAGCGCAAAG TTATTTCCGC
AGTTTTCAGT CCACTTTAAA TCAAAAGCAA GCCAGTAGTT TATTGAATAA CCAACCTCTG
CGTAAACTCA TTCGTAACCG TTTGGATTTC AAACGCATTG ATAATAACGT GGCAAGAGGA
TATTTACGGG CAATCAGTAT CAGTGCGTCA AGCTATAGCA CCCACGATTC AATTAGCTAT
TTTCAGGGGC ACCAAGATAT ACAGCCTTGG CATAGGCAGC AACGCCGGGG AATAAAAACC
GCTTTGCATA GCGAGCACTT AATGGCGTCA TCAGCCATTC CGTTAGTGTT TCCTCCTGTT
AAACTAGACG GGGAATTCCT TGGTGACGGC TCAGTCCACC AGCTTTCGCC TCTTAGCCCT
GCTATCCATC TTGGCGCTCA GAAGATATTC GTAATAGGTG TGGAACAACC CGAACGTGCT
CCGCGCTTTA CTAACGTTAT TCATTATCCC AGTAGCTTAG AAATTGCTGG GCATTTACTC
GATACTATTT TTGCCGACAC CTTGCGCTCT GATTTAGAGC GGTTGCATCG TATCAATCAA
ACGCTGGAAC AATTAGATGC CGAGCAACGT CAAAAGAGCG CGCTCAAGAC GATTGATTGT
TTAGTGATTA ATCCTAGTGT GACGTTTAAC GACATGGCAG CACGGCACTT TCATCAAATG
CCATCAGGCA TTAAATCACT GCTAAAAATA ATGGGATTAC ATAACAATGC GGATTCCTCG
ATACTCAGTT ACCTTCTGTT TGAAAAAGAA TACTGCAAAG AGTTAATCGC GCTAGGCTTT
AAAGATGGCC TAGCAAGAGC GGAGGAAATC CGTCATTTTC TGACAATATA G
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| Protein sequence | MHERNHYALL LSGGGARAAY QLGVLKSIST YLPRNQGIPF PIVCGSSAGA INATGLACYA
SCYHLGIRKL EHVWKNFTTR QVYGSGIRDV YSHLAQSYFR SFQSTLNQKQ ASSLLNNQPL
RKLIRNRLDF KRIDNNVARG YLRAISISAS SYSTHDSISY FQGHQDIQPW HRQQRRGIKT
ALHSEHLMAS SAIPLVFPPV KLDGEFLGDG SVHQLSPLSP AIHLGAQKIF VIGVEQPERA
PRFTNVIHYP SSLEIAGHLL DTIFADTLRS DLERLHRINQ TLEQLDAEQR QKSALKTIDC
LVINPSVTFN DMAARHFHQM PSGIKSLLKI MGLHNNADSS ILSYLLFEKE YCKELIALGF
KDGLARAEEI RHFLTI
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