| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1266 |
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| Symbol | |
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| ID | 4173277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1517817 |
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| End bp | 1519211 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638054273 |
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| Product | tRNA(Ile)-lysidine synthetase |
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| Protein accession | YP_660846 |
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| Protein GI | 109897591 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
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| TIGRFAM ID | [TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain
[TIGR02433] tRNA(Ile)-lysidine synthetase, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTTAT TCGACCATTT AGCAGCGCAA GTATCTGCAC TGAAACGCTC CCACCCATCT
CCTCTACACC TTGTTGTTGC TTACAGTGCT GGCATTGACT CTCATGTGCT GTTACATGCT
TTGTGGCAGT TAACACAAGC TGACATTTCG TCGTTTCAAT TAAGTGCTCT CTATATTCAT
CACGGGTTGA GTGATAATGC CGATAAATGG CAGCAGCACT GTGCCACTGT GTGCAGTGAA
CTTGAAGTCG AGTTTCATAG CGCCAAGGTA TTTGTTGATG TAGCGAGCGG GAACGGGATT
GAGGCACAAG CAAGAGATGC GCGTTATGCC AAATTAGTCG AAGTAGCGCC GCCAGGCAGT
GTTGTAGCGT TAGCACAGCA TCAAAACGAC CAGTTAGAAA CCGTATTACT GCAACTAAAA
CGTGGTGCTG GCCCAAAAGG CTTAAGTGGT ATGGGGCGTC TTTTTTCTCG CGCTAAACCT
TCGACACCTC AAGAGCAAGT ACATTTTTTT AGGCCTTTGC TAGAAATAAG CCAAGCGCAG
ATTCATCGTT ATGCTGATGA ACACGCGCTG GTGTGGCAAG AAGATGAGTC GAATCAAAAC
GTCGACTTTG AGCGTAATTT TATTCGCCGA GATATTAATC CGCTTTTACA TCAGCGTTGG
CCACACTTTG CTCAGTCGGT TTCCCGCAGC GCTCAGTTAT GCGCACAGCA GCAAGCGTTA
TTAGATGAAG TAACACAAGA AAAACTACTC TCGCTGCGAA ACCCAAACAA CACCTTGTCC
ATTGAGCTTC TCTTGGCGTT GACTGAGCCA TGGCGTTTGC AAGTGGTGCG CATGTGGCTA
GATACCCAGA GTATTCTCAG TCCAAGCCAA GCAATACTGG CACAGTTAAG CAGGGAGCTG
CTGTTAGCCG CGCAAGATGC TAGCCCAGTG ATACAGTGGC AAAAATGGCA ATTCAGGCGT
TTTGAAAATG CGCTTTATGT GATAACCATT CCTGAGCAGA TAAGTCCATA TGAAACGGTT
ATACAGCCGT GTGAAGTAAA AAAATTACCC TTATCCTTAG GGGAATTAGA GCTAAAACGT
GGGCAATTAA CCGAAGTAAG CGATGACAGC CTCAACATAG ATAATCTTGA TGTTGCCCCA
GTAAGCGTGG TCTTTGGTGG TTTTTCTCAG CGCTTTACAC CGCAAGATGC ACCTCAATCT
AAGCCGTTGA AGCAATGGTT CAAAGAGTGG AAGATACCTC CTTGGGAGCG CACGAACATC
GCGATCATCA GGCAGGGCGA GCAGATCATT GGCTTGCTGA TCCATGGTCG GTTTGTTGCT
GGAAAATCGA TTCAGCACAA AGCCGTATCG CAAAAAAAAC TTGATTCATC AGGCACCCTA
ACATACCAAA AGTAG
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| Protein sequence | MSLFDHLAAQ VSALKRSHPS PLHLVVAYSA GIDSHVLLHA LWQLTQADIS SFQLSALYIH
HGLSDNADKW QQHCATVCSE LEVEFHSAKV FVDVASGNGI EAQARDARYA KLVEVAPPGS
VVALAQHQND QLETVLLQLK RGAGPKGLSG MGRLFSRAKP STPQEQVHFF RPLLEISQAQ
IHRYADEHAL VWQEDESNQN VDFERNFIRR DINPLLHQRW PHFAQSVSRS AQLCAQQQAL
LDEVTQEKLL SLRNPNNTLS IELLLALTEP WRLQVVRMWL DTQSILSPSQ AILAQLSREL
LLAAQDASPV IQWQKWQFRR FENALYVITI PEQISPYETV IQPCEVKKLP LSLGELELKR
GQLTEVSDDS LNIDNLDVAP VSVVFGGFSQ RFTPQDAPQS KPLKQWFKEW KIPPWERTNI
AIIRQGEQII GLLIHGRFVA GKSIQHKAVS QKKLDSSGTL TYQK
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