Gene Patl_1259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1259 
Symbol 
ID4173270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp1509189 
End bp1510223 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content44% 
IMG OID638054266 
ProductUDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase 
Protein accessionYP_660839 
Protein GI109897584 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 
TIGRFAM ID[TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATCAAA CGGTTAGCTT ACAGCAATTA GCTGATAAAA TTGGAGCCTC GCTACATCTT 
ACTGATGGCG ACAGTGGTGA GACACAAATC CATTCACTGT CTACATTGGC GTCAGCAGGC 
AATGGTCAGA TTTCATTTTT GTCGAATAGT CGGTATCGTA GCCAGCTTGA AAAAACGGCC 
GCTCAGGCCG TTATTTTAAA ATCCGAAGAT TTATCGCATT GTCAGTGCTC AGCATTAGTG 
ATGGACAATC CCTATGTTGG GTTTGCACTC GCAGCACAAT TACTTGACTC TACTCCTCGT 
TCGGCCGACG GCATTTCACC TTTAGCGGTG ATAGCTGATG ATGTTGAATT GGGGGATAAC 
GTTAGTATTG GTGCGCATGC CGTTATTGAA TCGGGTGTTA AGCTAGCAGA TAACGTACAA 
ATTGGCCCCG GCTGCTTTAT TGGTAAAGAG GTAAGTGTTG GTGCCAATAC TAAGCTGTGG 
GCAAATGTCA CTCTGTATCA TCGCGTAGTA CTAGGGCAAG ACTGTTTAAT ACAATCTGCC 
ACTGTCATTG GTGCTGATGG TTTTGGTTAT GCAAATGACA AAGGCCGTTG GGTTAAAATA 
CCTCAGTTAG GCACGGTTAT CTTAGGAGAT CGTGTTGAAG TGGGTGCCAG TAGTACTATT 
GATCGTGGTG CGCTTGATGA CACCATCATT GGTAATGGTG TAATTATCGA TAATCAGTGT 
CAAGTCGCAC ACAATGTGAT TATTGGTGAG AACACTGCCA TCGCTGGATG CACAGTTGTC 
GCTGGAAGTG TTACTATTGG CCGCAATTGT ACAATTGGTG GCATGGTGGC AATTAACGGA 
CATATGGAAA TTTGTGATAA CGTTTATATT ACGGGGATGA GTATGGTGAC AAAAGCCATA 
GACAAACCTG GCGTTTACTC TTCCGGAATG CCCGCTATTG AAAACCGAGA GTGGCGAAAA 
AATGCAGTGG CGTTGCGTAA CCTTAGCACC CTCAATCAGC GTGTCAAAAC ACTCGAAAAA 
TCGCATTTAA AGTAA
 
Protein sequence
MNQTVSLQQL ADKIGASLHL TDGDSGETQI HSLSTLASAG NGQISFLSNS RYRSQLEKTA 
AQAVILKSED LSHCQCSALV MDNPYVGFAL AAQLLDSTPR SADGISPLAV IADDVELGDN 
VSIGAHAVIE SGVKLADNVQ IGPGCFIGKE VSVGANTKLW ANVTLYHRVV LGQDCLIQSA 
TVIGADGFGY ANDKGRWVKI PQLGTVILGD RVEVGASSTI DRGALDDTII GNGVIIDNQC 
QVAHNVIIGE NTAIAGCTVV AGSVTIGRNC TIGGMVAING HMEICDNVYI TGMSMVTKAI 
DKPGVYSSGM PAIENREWRK NAVALRNLST LNQRVKTLEK SHLK