| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1258 |
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| Symbol | |
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| ID | 4173269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1508631 |
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| End bp | 1509146 |
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| Gene Length | 516 bp |
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| Protein Length | 171 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638054265 |
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| Product | outer membrane chaperone Skp (OmpH) |
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| Protein accession | YP_660838 |
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| Protein GI | 109897583 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2825] Outer membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.631663 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAACAT TTACTAAAAG TCTTGTAGCA GGGGCATTAA TTGGCGCAGC AGCATTTAGT
AGTGCAGCAT TGGCAGAGCA AAAAATCGGT GCGGTTAACG TACAAGGTAT TTTTCAATCT
ATGCCTCAAG CAGCCACAAT TCAACAAGAC TTAGCGGCAG AGTTTAAAGA CAAAACTGAA
GAAGTTAGCC GCTTAGAAAA AGACATTAAG TATTACATTG AGAAGAATCA ACGTGATGCA
GCGACTATGA GCAGCAAAGA AAAAACTGAA CTTGAAGGCA AAATCAACGC TCTTCGTGAA
GAATATGCAG CTAAAGCGCA GCCGCTTCAA CAAGAAGTAC AAGGTCGTTT GAAAGAAGAG
CAAAATAAAT TGCTTGGTTT CATCAAGCAG TCAATTGACG TTGTTGCAGC GAAAGAAAAG
TATGACGTTA TATTAAACGC CAATGCAGTT GCGTTTATTA ATCCAGAAGA TGATATCTCT
AAGAAAGTAT TAGAGCAGGT CAGTAAAGTA AAATAA
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| Protein sequence | MKTFTKSLVA GALIGAAAFS SAALAEQKIG AVNVQGIFQS MPQAATIQQD LAAEFKDKTE
EVSRLEKDIK YYIEKNQRDA ATMSSKEKTE LEGKINALRE EYAAKAQPLQ QEVQGRLKEE
QNKLLGFIKQ SIDVVAAKEK YDVILNANAV AFINPEDDIS KKVLEQVSKV K
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