| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1246 |
|---|
| Symbol | |
|---|
| ID | 4173257 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 1493690 |
|---|
| End bp | 1494508 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638054253 |
|---|
| Product | metallophosphoesterase |
|---|
| Protein accession | YP_660826 |
|---|
| Protein GI | 109897571 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2908] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACA CACTGGTTTA TCGCGCGCAC TACCGCACAG TTTGGTTGTC TGATATTCAC
CTAGGCAGCA AAGACTGTAA AGCTGAATAC TTGCTCGACT TTTTAGAGCA CTCAACTATT
GAGACATTAT ACCTAGTAGG TGACATTATC GATATGTGGG CAATGAGCAA GCAATTCCGC
TGGCCTGAGG CACATAATAA GGTGCTTCAC AAACTCATGT GTTTATCAAA GGAAGACACT
CGCGTTATCT TTTTGCCCGG CAATCATGAT GCTCCATTGC AAAAATACGA TGGCATCACA
TTTGGTGAAA TCGAAATAGC CAGAGAAGCC GTTCACACTA CCGCAGACGG TAAAAAATTA
TTGGTGCTTC ATGGCGATCA GTTTGATCAA GAAGTTTGCT TCGGCCCTTT ACAGTCATGG
ATAGGCGATA AGGCATATGA CTTTTTATTA TTTATTAATC GTTGGTATAA CCGCGCTCGC
GCGTCGCTTA AATTCCCCTA TTGGTCATTG GCAGGCTATT TAAAGAGCCA TATAAAAGAG
GCTAATAAAG CCATTAGCCG CTATAAGCAT GCGTGCATTA ACCGCGCGAC GGAAATGGAC
TTAGACGGCG TCATTTGTGG GCACATTCAC CACCCCGAAG TTGATAATAT CAATGGGAAA
ACCTATTACA ACGATGGAGA CTGGATTGAA AACTGCTCAG CCTTAACGGA ATTAGCAAGC
GGGGAAATGA AGCTGATTTA CTGGACCCAG ACGGCTCACG CCAGCAACCT ATTCAACCTA
CGCATGAGCA AAGCAAAAGG CCAAAATAAA GCCGCCTGA
|
|---|
| Protein sequence | MKNTLVYRAH YRTVWLSDIH LGSKDCKAEY LLDFLEHSTI ETLYLVGDII DMWAMSKQFR
WPEAHNKVLH KLMCLSKEDT RVIFLPGNHD APLQKYDGIT FGEIEIAREA VHTTADGKKL
LVLHGDQFDQ EVCFGPLQSW IGDKAYDFLL FINRWYNRAR ASLKFPYWSL AGYLKSHIKE
ANKAISRYKH ACINRATEMD LDGVICGHIH HPEVDNINGK TYYNDGDWIE NCSALTELAS
GEMKLIYWTQ TAHASNLFNL RMSKAKGQNK AA
|
|---|
| |