| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1237 |
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| Symbol | |
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| ID | 4172703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1485762 |
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| End bp | 1486247 |
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| Gene Length | 486 bp |
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| Protein Length | 161 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638054244 |
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| Product | BadM/Rrf2 family transcriptional regulator |
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| Protein accession | YP_660817 |
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| Protein GI | 109897562 |
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| COG category | [K] Transcription |
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| COG ID | [COG1959] Predicted transcriptional regulator |
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| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator)
[TIGR02010] iron-sulfur cluster assembly transcription factor IscR |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00337607 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATTAA CTTCTAAAGG TCGTTACGCT GTTACAGCAA TGCTGGATGT AGCCTTACAT
TCACAGCGCG GTCCCGTGTC GTTAGCAGAT ATATCTGAGC GCCAAGAAAT ATCGTTATCT
TATTTAGAGC AACTTTTTTC ACGTTTACGC CGAGAAAAAT TGGTAGACAG TGTGCGTGGG
CCAGGCGGCG GTTACAAGTT GGGCCGCCAA CCCAGCGACA TTCCTATCGG TGAGGTCATT
CGTGCCGTAG ACGAGTCAGT TGATGCAACG CGTTGTCAAG GTCAGTCAGA TTGCCAAGGT
GGTGAGCGCT GTTTAACCCA CAGCTTGTGG CAAGATTTAA GTGAGCGGAT CAGCCTTTTT
CTCGATGGCA TTACTCTTGG AGAACTCATG GCGCAGCACG ACGTGAAATT AGTAGCAGAC
AGACAAGATA AAACGAAACA CCTCAATTAT ATTGCCGGCA ACGAAATCGA AGTGAGCCTG
CAGTAA
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| Protein sequence | MKLTSKGRYA VTAMLDVALH SQRGPVSLAD ISERQEISLS YLEQLFSRLR REKLVDSVRG
PGGGYKLGRQ PSDIPIGEVI RAVDESVDAT RCQGQSDCQG GERCLTHSLW QDLSERISLF
LDGITLGELM AQHDVKLVAD RQDKTKHLNY IAGNEIEVSL Q
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